| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2834 |
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| Symbol | nrdD |
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| ID | 1170531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2950929 |
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| End bp | 2953046 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637344652 |
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| Product | anaerobic ribonucleoside triphosphate reductase |
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| Protein accession | NP_718406 |
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| Protein GI | 24374363 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
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| TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGTCG TGATCAAGCG GGATGGTTGC CGCACACCTT TTGATGAAAC AAGGATAAGA
GATGCAGTGA TCGCCGCTGC AAACTCGGTT GGGATAGAGG ATACAGATTA TGCCGCGACG
GTAGCTGCTT GTGTGAGCGC GCGAGTGGCG AATATGGCTG AAGTTGAGAT CCACCATTTA
CAGGATGTGG TTGAAAACCT ATTGATGGAA GGCCCCTATA AGTCATTGGC ACGGGTCTAC
ATTGAATATC GCCACGACAG GGATATTTGC CGCGACGCTA CGAGCAAACT CAACTTAGAA
ATTCGTGGTT TAGTCGAGCA AAGTAATGCC GCACTGTTAA ATGAAAACGC CAATAAAGAT
TCTAAAGTCA TCCCTACTCA GCGGGATTTA TTAGCGGGTA TTGTCGCCAA GCATTACGCC
AAGAGCCATA TTTTGCCTAA GGATGTCGTG GCCGCCCACG AAATGGGTGA GATCCACTAT
CACGACCTCG ATTACTCGCC GTTTTTCCCG ATGTTCAACT GTATGTTGAT TGATTTGGCG
GGCATGTTGA CCCACGGCTT TAAGATGGGC AACGCCGAAA TTGAAACCCC TAAATCTATC
TCAACGGCCA CAGCTGTAAC GGCGCAAATT ATTGCCCAAG TAGCAAGCCA TATTTATGGC
GGTACGACCA TTAACCGTAT TGACGAAGTG TTAGCGCCGT TTGTGGCCAA GAGTTATGAC
AAGCATTATC AAGTGGCGCT GAATTGGCAG ATTAAAGATG CTAAAGCTTA CGCCACCGCG
CAGACCGAAA AAGAATGCCA TGATGCTTTT CAATCCCTTG AATATGAAGT TAATACCTTA
CATACCGCTA ATGGACAAAC CCCGTTTGTG ACCTTTGGTT TTGGGCTAGG AACCTCGTGG
GAGTCGCGTT TAATTCAGCA ATCGATGCTG AAAGTACGCA TGGCGGGCTT AGGTAAAAAT
CGTAAGACAG CGGTGTTTCC TAAATTGGTG TTTGCTATCC GTGATGGCAT TAACCACAAA
GTCGGCGATT GCAATTACGA TGTAAAACAA CTGGCCCTTA AATGCGCTAC GATGCGGATG
TATCCGGATA TTTTGAACTA CGAGCAAGTT GAAAAAGTCA CGGGCTCGTT CAAAACCCCT
ATGGGCTGCC GTAGCTTTTT AGGCTCCTAT AAAGAAAACG GTGAACTCGT GCATGAGGGG
CGTAATAACC TTGGCGTGGT CAGCTTAAAC TTGCCCCGGG TTGCCCTCGA GGCTAAAGGC
GATGAGGCTG AGTTTTATCG TATTTTAGAT GAGCGCCTAT TGCTTGCCCG CCGTGCATTA
GACACCCGCA TCGAACGGTT AAATGGCGTT AAAGCCAGAG TCGCACCCAT TTTATATATG
GAAGGCGCCT GTGGCGTGCG CCTGCGTGCC GACGATGATA TCGCTCAAAT CTTTAAAAAT
GGTCGTGCAT CGATTTCATT AGGCTATATC GGTTTACACG AAACCATTAA TGCACTCTAT
GGCACTGAAA CCCATGTGTT TGATAATGCG CAGCTTAGGG AAAAAGCCGT AGCGATAGTT
GCGTATCTCA AAGCGGCCAC CGACGCATGG AAGGCCGAAA CGGGTTATGG TTTTAGCCTT
TACAGCACGC CGAGTGAGAG TCTCTGTAGT CGCTTTTGTA AGCTCGATGC ACGCCAGTTT
GGCGTGGTCA CAGGGGTTAC CGATAAGGGC TATTACACCA ATAGTTTCCA CTTGGATGTG
GAAAAGCGGG TGAATCCTTA CGATAAAATC GATTTTGAGC AGCCATATCC TGCCATCGCC
AATGGCGGCT TTATCTGCTA CGGCGAATAT CCCAATATGC AGCACAATAT TGAAGCGCTC
GAAAATGTCT GGGATTACAG CTATAGCCGT GTACCTTACT ACGGCACTAA CACACCGATT
GACGAATGTT ATGATTGCGG TTTTACCGGT GAATTTAGCT GTACCAGCAA AGGATTTACC
TGCCCTAAAT GCGGCAACCA TGAGCCCAGC CGGGTATCAG TAACCCGCCG TGTGTGTGGT
TACTTAGGCA GTCCCGATGC CAGACCCTTT AACCATGGTA AGCAAGAAGA AGTGAAGCGT
AGGATCAAAC ACTTGTAA
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| Protein sequence | MPVVIKRDGC RTPFDETRIR DAVIAAANSV GIEDTDYAAT VAACVSARVA NMAEVEIHHL
QDVVENLLME GPYKSLARVY IEYRHDRDIC RDATSKLNLE IRGLVEQSNA ALLNENANKD
SKVIPTQRDL LAGIVAKHYA KSHILPKDVV AAHEMGEIHY HDLDYSPFFP MFNCMLIDLA
GMLTHGFKMG NAEIETPKSI STATAVTAQI IAQVASHIYG GTTINRIDEV LAPFVAKSYD
KHYQVALNWQ IKDAKAYATA QTEKECHDAF QSLEYEVNTL HTANGQTPFV TFGFGLGTSW
ESRLIQQSML KVRMAGLGKN RKTAVFPKLV FAIRDGINHK VGDCNYDVKQ LALKCATMRM
YPDILNYEQV EKVTGSFKTP MGCRSFLGSY KENGELVHEG RNNLGVVSLN LPRVALEAKG
DEAEFYRILD ERLLLARRAL DTRIERLNGV KARVAPILYM EGACGVRLRA DDDIAQIFKN
GRASISLGYI GLHETINALY GTETHVFDNA QLREKAVAIV AYLKAATDAW KAETGYGFSL
YSTPSESLCS RFCKLDARQF GVVTGVTDKG YYTNSFHLDV EKRVNPYDKI DFEQPYPAIA
NGGFICYGEY PNMQHNIEAL ENVWDYSYSR VPYYGTNTPI DECYDCGFTG EFSCTSKGFT
CPKCGNHEPS RVSVTRRVCG YLGSPDARPF NHGKQEEVKR RIKHL
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