Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2815 |
Symbol | |
ID | 1170514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 2936334 |
End bp | 2937653 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637344638 |
Product | CBS domain-containing protein |
Protein accession | NP_718390 |
Protein GI | 24374347 |
COG category | [R] General function prediction only |
COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATTT TTATTCTTAT TGGTTTGATT GTGTTAAATG GCTTATTTGC TATGTCGGAA ATCGCCATTG TGACTGCTCG CAAGTCACGG CTAACGGCCC TTGCTCATGC CGGTAGCAGC ACTGCTAAAG CCGCACTCAA ACTGGCAGAA GATCCAACGC AATTCTTGTC AACTGTGCAA ATAGGCATAA CATCAATAGG GATCTTAAAC GGAATATTTG GTGAATCCAT CCTCGCCGAA CCTTTGTCAC TTTGGCTTCA GACTTTTGGT CTAAGTCCAG ATGTGACCAA CATCTTTTCA ACCGTTCTAG TGGTTATCAT TGTCACTTAT GTGTCAATTG TCATTGGTGA GTTAGTTCCC AAGCGAATTG GTCAAGTCAG TGCTGAAAGT ATTGCCTGTA TAATGGCTAA ACCAATGGTA TTTCTAGCAA TAGCAACCAA ACCATTTGTA TGGATGTTAT CCGGTTCAAC TCATGCTCTT ATGCGTTTAA TGGGATTTTC GCATAGACTT GACGACAATG TGACTCAGGA AGATATTCAG GCAATGTTGC AGGAAGGTTC ATCTGCTGGG GTGATTGAGC ATAATGAACA TGCTATGGTT AAAAACGTTT TTCGATTAGA TGAACGTACT ATTTCTTCAT TGATGGTGCC ACGGTCTGAT ATTGTATTTC TTGACTTAAA CCTGCCTCTT GATGCAAATC TGCGAACTGT TATGCAGTCT CCTCACTCAC GATTTCCTGT TTGTCGTAAC AATGTCGATG ATATGGTGGG TATTATTTCA GCTAAACAAC TCCTTTCAGA GTCTATCGCG GGTGAACGTT TAGAACTGGT GGATCTCGTT AAGAATTGTA ACTTTGTACC CAACAGCTTA TCTGGAATGG AGCTACTTGA GCATTTTCGT ACTACAGGCT CGCAGATGGT GTTTGTTGTT GATGAATATG GTGATTTGAA AGGGCTGGTA ACGCTTCAAG ATATGATGGA TGCACTGACT GGTGAGTTTT TTCAGGAAGA TGTGAATGAC CAGATGGTGA TAAAAAGGGA AGATGGCTCA TTATTGCTAG ATGGTCTAAT CCCTATTTTT GACCTAAAAG ACGCTTTAGG TATCAAGCAA TTGCCAAATG AAGAGGATGG GCGTTATCAA ACGCTAAATG GATTTTTAAT GTATGAATTA GGCAAAATAC CTCAAACCAC AGATATTGTT GAGGTGGCGG GTTGGCGACT CGAGATTATG GATATGGACG GCAAAAGGGT TGATAAAGTT CTTGCTCAAA AGTTACCCGA TGCTGAAGAT TCAGAAGAGT CTATATTTGT TGATTTATAA
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Protein sequence | MEIFILIGLI VLNGLFAMSE IAIVTARKSR LTALAHAGSS TAKAALKLAE DPTQFLSTVQ IGITSIGILN GIFGESILAE PLSLWLQTFG LSPDVTNIFS TVLVVIIVTY VSIVIGELVP KRIGQVSAES IACIMAKPMV FLAIATKPFV WMLSGSTHAL MRLMGFSHRL DDNVTQEDIQ AMLQEGSSAG VIEHNEHAMV KNVFRLDERT ISSLMVPRSD IVFLDLNLPL DANLRTVMQS PHSRFPVCRN NVDDMVGIIS AKQLLSESIA GERLELVDLV KNCNFVPNSL SGMELLEHFR TTGSQMVFVV DEYGDLKGLV TLQDMMDALT GEFFQEDVND QMVIKREDGS LLLDGLIPIF DLKDALGIKQ LPNEEDGRYQ TLNGFLMYEL GKIPQTTDIV EVAGWRLEIM DMDGKRVDKV LAQKLPDAED SEESIFVDL
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