Gene SO_2781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2781 
Symbol 
ID1170481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp2902163 
End bp2902687 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content47% 
IMG OID637344610 
Producthypothetical protein 
Protein accessionNP_718362 
Protein GI24374319 
COG category[R] General function prediction only 
COG ID[COG1399] Predicted metal-binding, possibly nucleic acid-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACAG TAAAGATACC GGTTTCAATT GATCCTATTC GCGCCGCCTC AAGCCGTTCT 
ACCTATGAGG GGATAGTGCC AGGGCAGCAA TTGAAAAGAT TAAATGAGTT ATGTGCCGGC 
GACTGTTCCG ATGTGGCAGT GTCGCTTGAA TGTGGCGTAG ATTTGCAGGG GATAGTCTAC 
CTGAAAGGGA AGGCTGTGAC GGAGCTCACT CTGGTTTGTC AACGTTGCAT GACACTATTT 
ACCACTGAGG TTACGGTCGA GTTTTGCTTC GGTCCATGCC GGACTAAGGC AGAAATCGAT 
GAGCTCCCGG ATGCGTATGA CCCAATTGAG TGCAATGAGA TTGGCGAAGT ACGTCTGCAT 
CAATTGATCG AAGATGAATT GATAGTCGCT ATGCCTATTA TTCCGATGCA TGAAGAGACT 
GATTGCAATA TCGGATCCAT GGACATAGTT GTAGGCGAGA TCGAACCCGC TCAAGAGGAG 
CGTCCAAATC CGTTTGCAGT GTTAGAAAAA CTGAAGAGCA AGTAA
 
Protein sequence
MQTVKIPVSI DPIRAASSRS TYEGIVPGQQ LKRLNELCAG DCSDVAVSLE CGVDLQGIVY 
LKGKAVTELT LVCQRCMTLF TTEVTVEFCF GPCRTKAEID ELPDAYDPIE CNEIGEVRLH 
QLIEDELIVA MPIIPMHEET DCNIGSMDIV VGEIEPAQEE RPNPFAVLEK LKSK