| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2779 |
|---|
| Symbol | plsX |
|---|
| ID | 1170479 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 2900931 |
|---|
| End bp | 2901959 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637344608 |
|---|
| Product | putative glycerol-3-phosphate acyltransferase PlsX |
|---|
| Protein accession | NP_718360 |
|---|
| Protein GI | 24374317 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0416] Fatty acid/phospholipid biosynthesis enzyme |
|---|
| TIGRFAM ID | [TIGR00182] fatty acid/phospholipid synthesis protein PlsX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGAGTC TGACGCTCGC GTTAGATGCG ATGGGCGGCG ATCATGGCCC CCACGTCACA
GTGCCTGCAG CTTTGCGGGC ACTAAAATCT CATTCTTCCC TTAAAATCAT TTTAGTCGGT
GATAAGACTG AAATAGATGT CTATCTGCAC CAAGCAGAAC AAGAGTTACT CTCCCGTATT
CAAGTTATTC ACACCGATGA AGTGGTGAGC ATGTCTGACA GGCCCGTGCA TGCTTTGCGC
ACCCGTAAAA ATAGTTCGAT GCGCCTATCG ATTGAACTGG TGCGAGATGG ACGTGCTGCT
GCGTGCGTGA GTGCGGGAAA TACCGGCGCG TTAATGGCGA TGGCTAAGGT GTTGTTAAAA
ACCTTGCCCG GTGTGGACAG ACCTGCATTG GTCAGTTGTT TACCTTCAGT GACGCAAAAG
CCAGTTTATT TATTGGACTT AGGTGCCAAT ATTTCCTGCG ATTCAGAAAC ACTTTTCCAA
TTTGCCGTGA TGGGCTCTGT GCTGTGTGAA GCTGTGGATA AGAAATCCCG TCCGAAAGTG
GCGCTGCTAA ATGTGGGCAC AGAAGAAATC AAAGGCAACG ATCAGGTGCA ACAAGCGGCG
CAAATACTGC AAAACACCGA ACAGGTTAAT TACACCGGCT TTATTGAAGG TGATGAAATC
TATTCAGGAA ATGTGGATGT GATCGTTTGT GATGGTTTTG TGGGTAACAT CACGCTCAAA
ACCTCTGAAG GCATTGCCAA ACTATTGGTA CATCAGTTAA AACGGGGCCT AACCCAAGGT
TTCTTCGTGC GTTTTTTGGC AAAACTCATC GCCCCTCGCA TTCAGGCGGT CCTCAGCCAG
ATGAACCCCG ACCACTATAA TGGTGCAAGT CTGATAGGAT TGCGCGGCAT AGTTGTAAAG
AGCCATGGAA ATGCGGATGA AGCTGCTTAT TTACAAGCAA TTAGTTTGGC AGTGACTGAA
GCGCAACGTC GACTCCCCGA AATGATAAAA GATCGTTTGG AGTCGATTCT TTTAGATATA
AATAACTGA
|
|---|
| Protein sequence | MTSLTLALDA MGGDHGPHVT VPAALRALKS HSSLKIILVG DKTEIDVYLH QAEQELLSRI
QVIHTDEVVS MSDRPVHALR TRKNSSMRLS IELVRDGRAA ACVSAGNTGA LMAMAKVLLK
TLPGVDRPAL VSCLPSVTQK PVYLLDLGAN ISCDSETLFQ FAVMGSVLCE AVDKKSRPKV
ALLNVGTEEI KGNDQVQQAA QILQNTEQVN YTGFIEGDEI YSGNVDVIVC DGFVGNITLK
TSEGIAKLLV HQLKRGLTQG FFVRFLAKLI APRIQAVLSQ MNPDHYNGAS LIGLRGIVVK
SHGNADEAAY LQAISLAVTE AQRRLPEMIK DRLESILLDI NN
|
|---|
| |