Gene SO_2748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2748 
SymboltolB 
ID1170448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp2869191 
End bp2870519 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content47% 
IMG OID637344580 
Producttranslocation protein TolB 
Protein accessionNP_718332 
Protein GI24374289 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0823] Periplasmic component of the Tol biopolymer transport system 
TIGRFAM ID[TIGR02800] tol-pal system beta propeller repeat protein TolB 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTT TGGCAAAATG GTTAACATTG GTGGTACTGC TTTGTACCAC CCCCGCAAAA 
GCGGCACTGG ATATTGTGAT CACTGAAGGT GTGGATGCGG CCCGTCCTAT CGCTGTGATG
CCATTCCAAT GGCAAGGCGC AGGTGCGCCA CCGCAGGCAA TCGCCGATGT GGTCATGTCT
GACTTAGTGC GCAGTGGTAC GTTTAAACCC TTAGATGAAT TAGGTTTACC GCAACGCGGT
ATTGGTGCAT TAGCGCAGTT TGATGCGAAT GCTTGGACTA ACGTGAGTGC AGAAGCGTTG
GTGGTTGGTT CAGTCAAACC TTATGGTGCG GATCAGTTTC TGGTGAGCTT TGAGCTTATC
GATCTGGTTA AAGCGCAAAA CCAAGCCCTA AAGGGCTCCG CAAATCCAAC GGAATTGTTG
ATGGATAGTC GCCAGACCGT GATTTCTGCG ACGCAGTTTC GTCAATATGG CCATAGGATC
AGTGATATTG TCTATGAAAA GCTGACGGGT ATTCGTGGTG CCTTCTTGAC CCGTATTTCC
TACGTGGTGG TGAATCATAG CCAGAAAGCG GCTTATTCAC TGATGATCGC TGACTATGAC
GGTTACAACG AGCAAATGTT ACTGCGCTCT CCAGAGCCTT TAATGTCACC CGCTTGGTCA
CCCGATGGTC GCCGTTTAGC GTATGTGAGT TTTGAAAACA AAAAGGCTGA AATTTTTGTT
CAGGATCTTT ACACCCAAGT CCGTACTAAG GTGAGTAGTT TCTCTGGCAT TAACGGTGCG
CCTTCTTTTT CACCTGACGG TAAATCATTG GCCGTGACTC TCTCTAAGGA TGGTCAACCC
GAAATTTACG TCATTGATAT TGCCACTAAG GCAATTAAAC GAATTACCAA CCACTATTCC
ATCGATACTG AGCCTTCATG GTATCCCGAT GGTAAGTCAT TGTTGTTTAC CTCCGAGCGT
GGTGGTAGAC CACAGTTATA TCGTGTAGAT TTAAATTCAG GCAAAGTGAC CCGTGAAACC
TTTGAAGGTG AATGGAATTT AGGTGGTTCT ATTACCCCTG ATGGTCGCAG CATGATTTTT
GTGAATCGCA CAAATGGTAA ATTTAATATT GCACGTATGG ATTTAAGTAC GCGCTTTATG
CAGGTGCTGA CATCGACGCG TTTGGATGAA TCTCCAAGTG TGGCCCCCAA TGGTACTATG
GTGATTTATG GCACTACGCA TCAAGGCAAA CAAGTTTTAG CTGCTGTCTC TACGGACGGA
CGCTTTAAAG CGAGATTACC GGCAGGTCAG GGCGAGGTGA AATCACCTTC TTGGTCTCCG
TTTCTCTAA
 
Protein sequence
MKILAKWLTL VVLLCTTPAK AALDIVITEG VDAARPIAVM PFQWQGAGAP PQAIADVVMS 
DLVRSGTFKP LDELGLPQRG IGALAQFDAN AWTNVSAEAL VVGSVKPYGA DQFLVSFELI
DLVKAQNQAL KGSANPTELL MDSRQTVISA TQFRQYGHRI SDIVYEKLTG IRGAFLTRIS
YVVVNHSQKA AYSLMIADYD GYNEQMLLRS PEPLMSPAWS PDGRRLAYVS FENKKAEIFV
QDLYTQVRTK VSSFSGINGA PSFSPDGKSL AVTLSKDGQP EIYVIDIATK AIKRITNHYS
IDTEPSWYPD GKSLLFTSER GGRPQLYRVD LNSGKVTRET FEGEWNLGGS ITPDGRSMIF
VNRTNGKFNI ARMDLSTRFM QVLTSTRLDE SPSVAPNGTM VIYGTTHQGK QVLAAVSTDG
RFKARLPAGQ GEVKSPSWSP FL