Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2715 |
Symbol | |
ID | 1170415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 2832601 |
End bp | 2834802 |
Gene Length | 2202 bp |
Protein Length | 733 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637344539 |
Product | TonB-dependent receptor |
Protein accession | NP_718299 |
Protein GI | 24374256 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTAACA AAAAGTCTAA CAACAAATCT TCAATCTTCA CGATATCGTT AACTCGTGCA CCATTAGCGC TGGCCGTCTC TGCGGCTTTA AGTGCGTCGG CATGGGCGCA AACCGATGCT ATCGACAAAC CTGATCCCAA TAATGATATG GAAATCATGG TGGTTACGGC GGATTTTCGC AGTGCCAGTT TAGAAAAAAT GCCTTCAAGC ATTACCGTTA TCGATGCCCA GCAAATTCAA GATGAAAACG CCCAGCACTT TGAAGATGTG ATGAACTCCA TCGCCAACTT TAACTGGTCA GGTGGTAGTT CTCGCCCCAA GTATTTCCAG ATCCGTGGCG TGGGTGAGCA AGAGCAATAT CAAGGCGCAC CTAACTCATC AGTTGGTTAT ATTGTTGATG ATATTGATTT ATCCGGTATC GGCATGGTGT CGAGCATGTA CGATCTGCAG CAGGTTGAAG TGTTGCGCGG CCCGCAAGGG ACGCGTTACG GTGCCAATGC GTTAGCGGGC TTAATTTACC TTAAGAGTAA TGACCCAACC GATGTGTTTG AACATGGCGC CGAGGTTTCT TTAGGTAATG ACGATCTGCA AACCTTCAGT GGCTTTAGCT CTGGTCCCTT AAGCGATTCA GGTAAATTGT TATACCGCGT GGCGCTGCAG CAACATCAGC AAAACGGTTA TCGTGACAAT CTGTATTTAA ATAAAGAGGA TACCAATGGC CGCGATGAAT TTACCGGCCG CGCGAAATTG CGCTGGTATG CAACTGATGA TCTGCAACTG GATTTAACCC TGCTACATGC CGATTTTGAT AACGGTTATG ATGTGTGGAG TTTAACCAAC GATCCGACAA ACACCATAAC TGATCAACCG GGTGTCGATA GCCAGCGCAC CACAGGCGCA GGTTTTAAAG CGACTTATTC GGGGGCAGAG CAGTTTGAGT TGACCTCGCT GACTTCATTT GCCAATACCG ATCATCATTA TAGTTACGAT GGCGATTGGG CCAATTCTGA GTATTGGGCA TCTAAACAAT GTGAAGAGGG CGGTAATGTA TCGCCTTGTC AGTATGATTA CTTTTGGGAC AAAACCGGTC AGCGTAAAAC CTTATCCCAA GAGTTTCGTT TGAGCTCGAC CGACCAAGGC CGTATTTTTG CAGACTCAAC CGATTGGTTG ATTGGGGTTT ATGCCATGAA CCTCAAAGAA GATAACCAAT TGTATTCTGA ATATAATACC TGGCCTGATG AAGTGTTAGA TTCGCAGTAT GAAGCCACAA ACTATGCGTT ATTTGGCCAG CTGGACACCG ATTTAGGTGC TGACTATGTG TTATCAGTTG GGCTACGTGT GGAGCGTCGT AATAGTCACT ACTCAGACAC CAACAATGAT AATTTTGACC CGAGTGAAAC CATGTGGGGC GGCCATATCG CACTGAGTAA AGTGCTGAAT GAGTCCCACA ATGTCTACGC CCGAGTGGCG CGAGGTTACA AGGCGGGTGG TTTTAATATG ACCTTGCCAG TCGAACTCAA TGATAAAAAA GAGTTTGATA CCGAAACCCT ATACAACTAC GAAATCGGTT TAAAATCCCA TTGGTTTGAA GGGCTTATCG ACACTAATCT GGCGCTGTTC TATATGGATA GACAGGATCA GCAGGTGGCT GCTTCCCAGC AAGATCCTAA TAAGCCACAA CGGTTTATTC TCTACACTGA AAATGCGGGT AGCTCAAACA ACTACGGTGC TGAGCTAGAT GCAACTTGGT ACGCCACGGA TAATCTCCAG TTTTACTCAA GCCTTGGCTG GTTACAGACC GCTTACGGTA ATTACCAATA TCAAGATAAA TACGGTACTG ATGTGGATTT AACGGGGCGC GATCTGGCCC ATTCACCACA CTTAACCTAC AGCCTAGGCG GCACCTATCG TGCGAACTCG GGTTGGTTTG CCAACTTGAA TATGAGTGGT AAGAGCGAGT TTTACTACTC AGACAGTAAC GATTCCCGCT CCGAGCCATA TACTGTTGTG AATGCGCGTT TAGGTTATGA GGCAAGTGCG TGGTCGGCGT ATTTATGGGG CCGCAATTTA TTTGATGAAG AATATGGCGT TCGTGGCTTC TATTTTGGTA ATGAGCCCGA TAATGGCTGG GCGGAAAAAC AATATATCCG CTACGGCGAT CCACGCCAAA TTGGGGTAAC ACTGAACGTT AAGTTTATGT AG
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Protein sequence | MSNKKSNNKS SIFTISLTRA PLALAVSAAL SASAWAQTDA IDKPDPNNDM EIMVVTADFR SASLEKMPSS ITVIDAQQIQ DENAQHFEDV MNSIANFNWS GGSSRPKYFQ IRGVGEQEQY QGAPNSSVGY IVDDIDLSGI GMVSSMYDLQ QVEVLRGPQG TRYGANALAG LIYLKSNDPT DVFEHGAEVS LGNDDLQTFS GFSSGPLSDS GKLLYRVALQ QHQQNGYRDN LYLNKEDTNG RDEFTGRAKL RWYATDDLQL DLTLLHADFD NGYDVWSLTN DPTNTITDQP GVDSQRTTGA GFKATYSGAE QFELTSLTSF ANTDHHYSYD GDWANSEYWA SKQCEEGGNV SPCQYDYFWD KTGQRKTLSQ EFRLSSTDQG RIFADSTDWL IGVYAMNLKE DNQLYSEYNT WPDEVLDSQY EATNYALFGQ LDTDLGADYV LSVGLRVERR NSHYSDTNND NFDPSETMWG GHIALSKVLN ESHNVYARVA RGYKAGGFNM TLPVELNDKK EFDTETLYNY EIGLKSHWFE GLIDTNLALF YMDRQDQQVA ASQQDPNKPQ RFILYTENAG SSNNYGAELD ATWYATDNLQ FYSSLGWLQT AYGNYQYQDK YGTDVDLTGR DLAHSPHLTY SLGGTYRANS GWFANLNMSG KSEFYYSDSN DSRSEPYTVV NARLGYEASA WSAYLWGRNL FDEEYGVRGF YFGNEPDNGW AEKQYIRYGD PRQIGVTLNV KFM
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