Gene SO_2715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2715 
Symbol 
ID1170415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp2832601 
End bp2834802 
Gene Length2202 bp 
Protein Length733 aa 
Translation table11 
GC content46% 
IMG OID637344539 
ProductTonB-dependent receptor 
Protein accessionNP_718299 
Protein GI24374256 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAACA AAAAGTCTAA CAACAAATCT TCAATCTTCA CGATATCGTT AACTCGTGCA 
CCATTAGCGC TGGCCGTCTC TGCGGCTTTA AGTGCGTCGG CATGGGCGCA AACCGATGCT
ATCGACAAAC CTGATCCCAA TAATGATATG GAAATCATGG TGGTTACGGC GGATTTTCGC
AGTGCCAGTT TAGAAAAAAT GCCTTCAAGC ATTACCGTTA TCGATGCCCA GCAAATTCAA
GATGAAAACG CCCAGCACTT TGAAGATGTG ATGAACTCCA TCGCCAACTT TAACTGGTCA
GGTGGTAGTT CTCGCCCCAA GTATTTCCAG ATCCGTGGCG TGGGTGAGCA AGAGCAATAT
CAAGGCGCAC CTAACTCATC AGTTGGTTAT ATTGTTGATG ATATTGATTT ATCCGGTATC
GGCATGGTGT CGAGCATGTA CGATCTGCAG CAGGTTGAAG TGTTGCGCGG CCCGCAAGGG
ACGCGTTACG GTGCCAATGC GTTAGCGGGC TTAATTTACC TTAAGAGTAA TGACCCAACC
GATGTGTTTG AACATGGCGC CGAGGTTTCT TTAGGTAATG ACGATCTGCA AACCTTCAGT
GGCTTTAGCT CTGGTCCCTT AAGCGATTCA GGTAAATTGT TATACCGCGT GGCGCTGCAG
CAACATCAGC AAAACGGTTA TCGTGACAAT CTGTATTTAA ATAAAGAGGA TACCAATGGC
CGCGATGAAT TTACCGGCCG CGCGAAATTG CGCTGGTATG CAACTGATGA TCTGCAACTG
GATTTAACCC TGCTACATGC CGATTTTGAT AACGGTTATG ATGTGTGGAG TTTAACCAAC
GATCCGACAA ACACCATAAC TGATCAACCG GGTGTCGATA GCCAGCGCAC CACAGGCGCA
GGTTTTAAAG CGACTTATTC GGGGGCAGAG CAGTTTGAGT TGACCTCGCT GACTTCATTT
GCCAATACCG ATCATCATTA TAGTTACGAT GGCGATTGGG CCAATTCTGA GTATTGGGCA
TCTAAACAAT GTGAAGAGGG CGGTAATGTA TCGCCTTGTC AGTATGATTA CTTTTGGGAC
AAAACCGGTC AGCGTAAAAC CTTATCCCAA GAGTTTCGTT TGAGCTCGAC CGACCAAGGC
CGTATTTTTG CAGACTCAAC CGATTGGTTG ATTGGGGTTT ATGCCATGAA CCTCAAAGAA
GATAACCAAT TGTATTCTGA ATATAATACC TGGCCTGATG AAGTGTTAGA TTCGCAGTAT
GAAGCCACAA ACTATGCGTT ATTTGGCCAG CTGGACACCG ATTTAGGTGC TGACTATGTG
TTATCAGTTG GGCTACGTGT GGAGCGTCGT AATAGTCACT ACTCAGACAC CAACAATGAT
AATTTTGACC CGAGTGAAAC CATGTGGGGC GGCCATATCG CACTGAGTAA AGTGCTGAAT
GAGTCCCACA ATGTCTACGC CCGAGTGGCG CGAGGTTACA AGGCGGGTGG TTTTAATATG
ACCTTGCCAG TCGAACTCAA TGATAAAAAA GAGTTTGATA CCGAAACCCT ATACAACTAC
GAAATCGGTT TAAAATCCCA TTGGTTTGAA GGGCTTATCG ACACTAATCT GGCGCTGTTC
TATATGGATA GACAGGATCA GCAGGTGGCT GCTTCCCAGC AAGATCCTAA TAAGCCACAA
CGGTTTATTC TCTACACTGA AAATGCGGGT AGCTCAAACA ACTACGGTGC TGAGCTAGAT
GCAACTTGGT ACGCCACGGA TAATCTCCAG TTTTACTCAA GCCTTGGCTG GTTACAGACC
GCTTACGGTA ATTACCAATA TCAAGATAAA TACGGTACTG ATGTGGATTT AACGGGGCGC
GATCTGGCCC ATTCACCACA CTTAACCTAC AGCCTAGGCG GCACCTATCG TGCGAACTCG
GGTTGGTTTG CCAACTTGAA TATGAGTGGT AAGAGCGAGT TTTACTACTC AGACAGTAAC
GATTCCCGCT CCGAGCCATA TACTGTTGTG AATGCGCGTT TAGGTTATGA GGCAAGTGCG
TGGTCGGCGT ATTTATGGGG CCGCAATTTA TTTGATGAAG AATATGGCGT TCGTGGCTTC
TATTTTGGTA ATGAGCCCGA TAATGGCTGG GCGGAAAAAC AATATATCCG CTACGGCGAT
CCACGCCAAA TTGGGGTAAC ACTGAACGTT AAGTTTATGT AG
 
Protein sequence
MSNKKSNNKS SIFTISLTRA PLALAVSAAL SASAWAQTDA IDKPDPNNDM EIMVVTADFR 
SASLEKMPSS ITVIDAQQIQ DENAQHFEDV MNSIANFNWS GGSSRPKYFQ IRGVGEQEQY
QGAPNSSVGY IVDDIDLSGI GMVSSMYDLQ QVEVLRGPQG TRYGANALAG LIYLKSNDPT
DVFEHGAEVS LGNDDLQTFS GFSSGPLSDS GKLLYRVALQ QHQQNGYRDN LYLNKEDTNG
RDEFTGRAKL RWYATDDLQL DLTLLHADFD NGYDVWSLTN DPTNTITDQP GVDSQRTTGA
GFKATYSGAE QFELTSLTSF ANTDHHYSYD GDWANSEYWA SKQCEEGGNV SPCQYDYFWD
KTGQRKTLSQ EFRLSSTDQG RIFADSTDWL IGVYAMNLKE DNQLYSEYNT WPDEVLDSQY
EATNYALFGQ LDTDLGADYV LSVGLRVERR NSHYSDTNND NFDPSETMWG GHIALSKVLN
ESHNVYARVA RGYKAGGFNM TLPVELNDKK EFDTETLYNY EIGLKSHWFE GLIDTNLALF
YMDRQDQQVA ASQQDPNKPQ RFILYTENAG SSNNYGAELD ATWYATDNLQ FYSSLGWLQT
AYGNYQYQDK YGTDVDLTGR DLAHSPHLTY SLGGTYRANS GWFANLNMSG KSEFYYSDSN
DSRSEPYTVV NARLGYEASA WSAYLWGRNL FDEEYGVRGF YFGNEPDNGW AEKQYIRYGD
PRQIGVTLNV KFM