Gene SO_2708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2708 
Symbol 
ID1170409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp2827927 
End bp2828475 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content50% 
IMG OID637344533 
Productnitroreductase family protein 
Protein accessionNP_718292 
Protein GI24374249 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGACGCTA TCGAACTTTT ACTCACTCGC CAATCCACCC CAAGATTAAC TTCTCCGGCG 
CCTAACGAGC GCGAGCTAAA AATCATCTTA GATGCTGCGA TACGGGTACC GGATCATGGT 
GCTTTAGCAC CCTGGGAATT CATTATTGCC ACGGGGAAGG GATTAGACAC CTTAGCGGAT 
ATCTATGTTT ATGCCGCCAA AGCCAGTGGC GGTGACGAGG ATTTTATTCA TAAAGCCAAA 
GGGATGCCGA TGCGAGCTCC TATGGTGATA ACGGTTGTTG CTAAAACGCA GCAACATCCT 
AAAGTGCCAG TGCTCGAGCA GCAAATTGCT GCGGGCTGCG CTACGATGGC CATGCAGCAG 
GCCGCATTTG CTTTAGGATT AGGTGCGGTG TGGCGTACTG GGGATTTTGC CTTTGATGCC 
AATGTGAATG CGGCATTAGG CTTAGCACCA GAGGATCAAA TTGTGGGCTT TTTATATGTA 
GGCACCCCTG CAGTTGCTGC CCCAATTAAA CTCCAAAAAG ACGGCAGCCA GTACGCCCGT 
TATTTATAA
 
Protein sequence
MDAIELLLTR QSTPRLTSPA PNERELKIIL DAAIRVPDHG ALAPWEFIIA TGKGLDTLAD 
IYVYAAKASG GDEDFIHKAK GMPMRAPMVI TVVAKTQQHP KVPVLEQQIA AGCATMAMQQ 
AAFALGLGAV WRTGDFAFDA NVNAALGLAP EDQIVGFLYV GTPAVAAPIK LQKDGSQYAR 
YL