Gene SO_2616 details

Gene Information

• Locus tag: SO_2616
• Symbol: dcd
• ID: 1170318
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 2752176
• End bp: 2752757
• Gene Length: 582 bp
• Protein Length: 193 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 637344443
• Product: deoxycytidine triphosphate deaminase
• Protein accession: NP_718201
• Protein GI: 24374158
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0717] Deoxycytidine deaminase
• TIGRFAM ID: [TIGR02274] deoxycytidine triphosphate deaminase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCTTAA CCGATATCGA AATTGAACAG GCCCTTGATA ATGGCACAAT TGTGATTGAA 
CCTCGCCCAA ACAACGATGC AATATCTGGT GTGAGTGTCG ATGTGCGATT AGGGGGGCAA 
TTTCGCGTCT TTAAAGATCA TACCGCGCCT TTTATCGATC TCAGTGGTCC AAGTGGCGAA 
GTCCAGGCTG CGCTCGATCG GGTGATGAGT GAAATCATCG AAATCCCCGA CGGCGAAGCC 
TTCTTCCTGC ATCCTGGAGA GCTGGCCTTA GCCGTGACCT ATGAGAGCGT GACGCTGCCT 
GCTGATATTG TCGGTTGGCT CGATGGCCGC TCCTCTCTGG CGCGTTTAGG CTTGATGGTA 
CACGTGACCG CGCATCGTAT TGATCCGGGC TGGCAGGGTA AAATTGTGCT CGAGTTTTAC 
AACAGTGGTA AGTTGCCTTT AGCACTGCGC CCACGGATGA CAATTGGTGC GTTAAATTTT 
GAACGTTTAA GTGGCCCAGT TGCGCGTCCG TACAACAAGC GCAAAAATGC CAAGTATAAA 
GATCAACAGG ATGCGGTTGC CAGCCGTATT AGCCAGGATT AA 

 

Protein sequence

MRLTDIEIEQ ALDNGTIVIE PRPNNDAISG VSVDVRLGGQ FRVFKDHTAP FIDLSGPSGE 
VQAALDRVMS EIIEIPDGEA FFLHPGELAL AVTYESVTLP ADIVGWLDGR SSLARLGLMV 
HVTAHRIDPG WQGKIVLEFY NSGKLPLALR PRMTIGALNF ERLSGPVARP YNKRKNAKYK 
DQQDAVASRI SQD