Gene SO_2588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2588 
Symbol 
ID1170290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp2715508 
End bp2716413 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content49% 
IMG OID637344416 
Productbifunctional methionine sulfoxide reductase B/A protein 
Protein accessionNP_718174 
Protein GI24374131 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0225] Peptide methionine sulfoxide reductase
[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00357] methionine-R-sulfoxide reductase
[TIGR00401] methionine-S-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAC TGACTGATTT TGAACGCTAT GTCATAGAAG AAAAGGGCAC CGAACGCCCC 
TTTAGTGGCC AGTATTATCA ACACGATGCC AAAGGGGTGT ATTTGTGCAA AAAATGCCAT 
ACGCCTTTGT ATCGTTCAGA AGATAAGTTT AATGCCCATT GCGGTTGGCC TGCCTTTGAT 
GATGAAATTC CGGGTGCCGT TAGCCGTCAT ATCGACGCTG ATGGTCGCCG CACCGAAATC 
GTTTGCAGCC AGTGTGGCGG GCATTTGGGC CATGTTTTTG AAGGGGAGTT TTTAACGCCG 
AAGAATATTC GCCACTGCGT TAATTCTGTC TCGATGTTGT TTAAAGCCCA GGATGAAGCC 
GAAGATATTG CCCCAAAACA TGCTTTTGCC ACCTTTGGCG CTGGCTGTTT TTGGTGTGTT 
GAAGCGATTT TCAAGAGCCT TAAGGGCGTG CTGAACGTCA GATCAGGTTA CTCTGGCGGC 
GAGGCGAGCG ATGCCGACTA TAAATCTGTG TGTTCTGGAC AAACGGGGCA TGCTGAGGTG 
GTGCACATTG AGTTTGACCC TGAGCAAATC GCCTTTACCA CGCTGTTGCA GGTGTTATTT 
GAGAGTCACG ACCCGACCAC TTTAAATCGT CAAGGCAATG ATAAAGGGCC GCAATATCGC 
TCCGTGGTTT TTGCCCACGA TGCAACTCAG GTTGATGAAG CCAACGCCAT GATCGCCAAG 
TTAACTGAGG CACGGGTATT TGATGCGCCA ATCGTCACCC AAGTGGTGGC ATTTGAGTCG 
TTTTATCCTG CTGAAGCGTA CCACAATGAC TACTTTGCCC TGCATGGCGA GCAGCCCTAT 
TGCCAAATCG TGGTGCGGCC AAAGGTCGAA AAAATCAGAG CATTATTTGC CGAACTGCAA 
GTTTAA
 
Protein sequence
MNKLTDFERY VIEEKGTERP FSGQYYQHDA KGVYLCKKCH TPLYRSEDKF NAHCGWPAFD 
DEIPGAVSRH IDADGRRTEI VCSQCGGHLG HVFEGEFLTP KNIRHCVNSV SMLFKAQDEA 
EDIAPKHAFA TFGAGCFWCV EAIFKSLKGV LNVRSGYSGG EASDADYKSV CSGQTGHAEV 
VHIEFDPEQI AFTTLLQVLF ESHDPTTLNR QGNDKGPQYR SVVFAHDATQ VDEANAMIAK 
LTEARVFDAP IVTQVVAFES FYPAEAYHND YFALHGEQPY CQIVVRPKVE KIRALFAELQ 
V