| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2581 |
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| Symbol | fadD-1 |
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| ID | 1170283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2707886 |
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| End bp | 2709559 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637344409 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | NP_718167 |
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| Protein GI | 24374124 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATCAGC CTTGGATTAG ACATTTACCA AAAGATGTGC CTGCTGAGAT TAATGTGGAT
CAGTATTCAT CGCTTATCGA TATGTTCGAG ACCGCGGTGG CTAAGTATGC GGATCAACCT
GCATTTATCA ACATGGGGGC CACGCTAACT TACCGCAAAC TCGAAGAACG CAGTCGCGCG
TTTGCTGCTT ATTTACAAAA TGAATTGAAG CTGCAGAAGG GCGACCGTGT TGCACTCATG
ATGCCCAATT TATTGCAGTA CCCCATTGCG CTCTTCGGTA TTTTACGTGC TGGCATGGTG
GTGGTTAACG TTAACCCACT ATACACCCCT CGCGAATTAA AACACCAGTT AATTGATTCG
GGTGCGAAAG CGATTGTGGT GGTGTCGAAC TTTGCTCGAA CATTAGAAGA AGTGGTCGAT
CAGACGCCTG TTAAGAGTGT GATTATCACT GGACTTGGGG ATCTCTTAAG TGCGCCAAAA
CGCACTTTAG TGAACTTTGT TGTTAAATAC ATCAAAAAAC TGGTACCAAA ATACGATTTA
CCCCATGCAC TTTCAATGCG CGAAACGCTG TCAAGAGGTC GACGTATGCA GTACGTCAAA
CCTGTTATTA CAGGGGATGA CCTCGCATTT TTACAGTATA CCGGTGGTAC GACTGGGGTT
TCAAAGGGTG CCATGTTGAC CCACAGCAAT GTCGTGGCGA ACGTATTGCA GGCAAATGGT
GCTTATTCGC CTGCGCTGCG AGATGGTAGT GAATTTGTGG TAACAGCATT GCCGCTTTAC
CATATTTTTG CGTTAACCGT GAACTGCTTG CTGTTTTTAC ACAAGGGCAG TCAAAACCTA
TTGATCACTA ACCCTCGTGA TATCCCTGGT TTTGTGGCTG AACTCAAAAA ATACCCCTTT
ACCGCGCTGA CAGGTGTCAA CACCTTATTC AATGCTTTAG TTAACAGTAG TGATTTTTCT
GAGTTAGATT TCTCTCGTCT AAAACTCTCC ATCGGTGGCG GCATGGCAGT GCAAAAAGCC
GTGGCCGATA AATGGCAGAA CATTACCAAA ACTCGTTTAC TCGAAGGTTA TGGCCTAACA
GAAGCTTCAC CGTTATTAAC CTGTTGTCCA TATAATTTAG ATGGTTACAA CGGTTCTATC
GGTTTTCCTG CGCCATCAAC CTTGATCCAA GTGCGCGATG ATGCGGGTAA TGTCTTACCG
CAAGGTGAGA CTGGTGAGCT GTTCGGTAAA GGCCCACAGA TCATGAAAGG GTATTGGCAA
CGTCCAGAAG AAACCGCCAA AGTGATTGAT AATGACGGTT GGCTCGCCAC GGGTGATATC
GGCTATATGG ATGAGCAGGG ATTCTTCTAT ATTGTCGATC GTAAGAAGGA CATGATTTTA
GTGTCTGGTT TTAACGTATT CCCCAATGAA GTCGAAGAGG TGGTTGCCTT ACATCCTAAG
GTGATTGAAG TGGCAGCAGT GGGTGTGCCC AATGACGCCA GCGGTGAATT AGTGAAGGTA
TTTGTGGTGA AAAAAGATAA ATCTTTAACC GCTGAAGACA TCATTAAGCA TTGCCGTGTG
CATTTAACGG GATATAAAGT ACCGAAGCTG GTAGAATTTA GGGACGAGTT ACCTAAAACC
AATGTGGGTA AGATCCTGCG ACGAGAACTT AGAGACGAAG TTAAGCGTGC GTAA
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| Protein sequence | MDQPWIRHLP KDVPAEINVD QYSSLIDMFE TAVAKYADQP AFINMGATLT YRKLEERSRA
FAAYLQNELK LQKGDRVALM MPNLLQYPIA LFGILRAGMV VVNVNPLYTP RELKHQLIDS
GAKAIVVVSN FARTLEEVVD QTPVKSVIIT GLGDLLSAPK RTLVNFVVKY IKKLVPKYDL
PHALSMRETL SRGRRMQYVK PVITGDDLAF LQYTGGTTGV SKGAMLTHSN VVANVLQANG
AYSPALRDGS EFVVTALPLY HIFALTVNCL LFLHKGSQNL LITNPRDIPG FVAELKKYPF
TALTGVNTLF NALVNSSDFS ELDFSRLKLS IGGGMAVQKA VADKWQNITK TRLLEGYGLT
EASPLLTCCP YNLDGYNGSI GFPAPSTLIQ VRDDAGNVLP QGETGELFGK GPQIMKGYWQ
RPEETAKVID NDGWLATGDI GYMDEQGFFY IVDRKKDMIL VSGFNVFPNE VEEVVALHPK
VIEVAAVGVP NDASGELVKV FVVKKDKSLT AEDIIKHCRV HLTGYKVPKL VEFRDELPKT
NVGKILRREL RDEVKRA
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