| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2563 |
|---|
| Symbol | |
|---|
| ID | 1170268 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 2692498 |
|---|
| End bp | 2693301 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637344394 |
|---|
| Product | metallo-beta-lactamase family protein |
|---|
| Protein accession | NP_718149 |
|---|
| Protein GI | 24374106 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | [TIGR03413] hydroxyacylglutathione hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCACTA TAACAGCGAT TAATGCCTTT AATGACAATT ATATCTGGGT GTTGCAACAA
GACACTCAGC AAGCCGTTTA TGTGGTTGAT CCCGGTGATG TTAACGTTGT ACTCGATTAC
TTAAACGCAC ATCAATTGAC GCTTGCTGGA ATTTTGATCA CGCACCACCA TAGGGATCAC
ACTGGCGGTA TTGCCGCACT TGTGGCTTAT GTTGAACAAA CAACAGGCCA CACCTTAGCA
GTTTATGGTC CACAAAGTGA AGCTATTCAA GGTGTTAACA TTGCCATTGA GCCACAAATC
ACACAAATAC TCCACTTACC CTTCCTCAAT AGTCCTGTGC AGGTACTGTC TGTGCCTGGC
CATACGGCGG GGCATATAGC GTATCTGGTT GATGGTGCAC TATTTTGTGG TGATACACTT
TTTAGTGGAG GATGCGGCCG GCTATTTGAG GGAACACCTG CACAAATGTG CCACTCGTTA
CGCTTGCTCG CGGCTCTGCC TGCCGAGACT AGAGTGTACT GTGCCCACGA ATATACTCTC
GCGAATCTTA AATTTGCCCA AGCGGCCGAC CCAAGCAATG CCAAACTCAA GGCTTATAAT
GAACAAGCAA CAGCCCTTCG TGCCCAAGGA AAAGCCACCA TCCCCTCCAC AATAGGATTG
GAGCGATCAA TTAATCCCTT CCTTCGGGGG CTGACGCCAA CCATAGTGGA CAGTATAAAA
CAGCAGTTTT GTGATCAAGA TCTGAGTAAC GTAGATGAAC TCACTTATTT TACCCTACTT
AGGCAGTGGA AAGATATTTT TTAG
|
|---|
| Protein sequence | MLTITAINAF NDNYIWVLQQ DTQQAVYVVD PGDVNVVLDY LNAHQLTLAG ILITHHHRDH
TGGIAALVAY VEQTTGHTLA VYGPQSEAIQ GVNIAIEPQI TQILHLPFLN SPVQVLSVPG
HTAGHIAYLV DGALFCGDTL FSGGCGRLFE GTPAQMCHSL RLLAALPAET RVYCAHEYTL
ANLKFAQAAD PSNAKLKAYN EQATALRAQG KATIPSTIGL ERSINPFLRG LTPTIVDSIK
QQFCDQDLSN VDELTYFTLL RQWKDIF
|
|---|
| |