Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2559 |
Symbol | dnaQ-2 |
ID | 1170264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 2689376 |
End bp | 2690104 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637344390 |
Product | DNA polymerase III, epsilon subunit |
Protein accession | NP_718145 |
Protein GI | 24374102 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family [TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATTA TCTCAAACGC AAGCCGTCAG GTTATTTTAG ATACTGAAAC CACGGGTATG AACCAAGGCA GTGGTGCGGT GTATTTAGGG CACAGAATTA TTGAGATAGG TTGTGTTGAG GTCATCAACC GCCGTTTAAC GGGCCGTTAT TATCACCAGT ATATAAATCC CGGCCAAGCG ATTGATCCAG AAGCGATCGC GGTTCATGGG ATCACCGATG AACGTGTTGC GAATGAGCCA AGATTCCATC AAATCGCCCA AGAGTTTATC GATTTTATCA GTGGCGCCGA AATTGTGGCC CATAACGCAA ACTTCGACGT GAGCTTTATG GACCATGAGT TTTCCTTACT GCAGCCCTTA GGGCCAAAGA CTCGCGACAT TTGTGAGATT TTAGACTCCC TCGACATTGC TAAGTTTTTG CACCCCGGAC AAAAGAACAA CTTAGACGCA CTCTGTAAAC GTTATGGCAT CGACAACTCT CGTCGCCATT ACCATGGCGC ATTACTCGAC GCCGAAATCC TTGCCGATGT CTATTTATCG ATGACGGGTG GGCAGACTAA GTTTAATCTC TCTAACGAAG AAGTCGGTCA AGAGGGGGGC GGCATTCAAC GCTTTGATCC CACATCACTT AATCTTAAAG TGATCTGCGC ATCGGCCGAT GAACTCGTTA TGCATGAAAA GCGCCTTGAT TTAGTCGCAA AATCAGGAAA ATGCCTCTGG AGAGGATAA
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Protein sequence | MNIISNASRQ VILDTETTGM NQGSGAVYLG HRIIEIGCVE VINRRLTGRY YHQYINPGQA IDPEAIAVHG ITDERVANEP RFHQIAQEFI DFISGAEIVA HNANFDVSFM DHEFSLLQPL GPKTRDICEI LDSLDIAKFL HPGQKNNLDA LCKRYGIDNS RRHYHGALLD AEILADVYLS MTGGQTKFNL SNEEVGQEGG GIQRFDPTSL NLKVICASAD ELVMHEKRLD LVAKSGKCLW RG
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