Gene SO_2493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2493 
Symbol 
ID1170206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp2618065 
End bp2618784 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content45% 
IMG OID637344322 
ProductTetR family transcriptional regulator 
Protein accessionNP_718080 
Protein GI24374037 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCCATTT TTCGTTTGAC AACTCCCATA CCAATGTTTA ATTTAAACGA GTGTTTTAAA 
TTAATTCAAG GTCATGGAAT GGCAAGTCGA TCTGATACAA AAACGAGAAT ACTTGATGCT 
GCGGAGAAAC TCTTTGCCGA AAGAGGTTTT TCTGAGACGT CATTACGACT TATTACCAGC 
AAGGCAGAGG TCAATTTAGC GTCGGTAAAT TATCACTTTG GCTCTAAAAA AGAGTTGATC 
CGTGCAGTGT TAGCCCGCTA TTTAGATGTA TTTATGCCCG CTGCATCAAC GGCGATAAAG 
CGTCTGCATA CAGCGCCATC TCAGGCTTCG TTAGAGGAAA TTTTCTCAGC GTTAGTCGAT 
CCGTTATTGG ATTTAAATGA CTTGCGGACT GAAGGGACCA CGATTTTCCT GCAGCTACTT 
GGAAGAGGCT ACATTGAAAG CCAAGGACAT CTTCGCTGGT TTATCACCAC CCATTACGGA 
CAGCATTTAG ATACCTTCGT GAAGGCGGTG TCGGCAAGTG CTCCCCATAT ACCTCCTGCT 
GAAATGTTTT GGCGCTTACA CTTCACCCTC GGCACAATCG TTTTCACTAT GGCGTCCGCT 
GATGCGTTAA ACGATATTGC TGCGGCCGAA TTTGGTGAGC ACAACGATAT TGAAGCCGTG 
ATCCGCAAAG TGATCCCCTA CATGGCTGCG GGCGTATCTG TTCCCGTGGC TTCTAAATAA
 
Protein sequence
MAIFRLTTPI PMFNLNECFK LIQGHGMASR SDTKTRILDA AEKLFAERGF SETSLRLITS 
KAEVNLASVN YHFGSKKELI RAVLARYLDV FMPAASTAIK RLHTAPSQAS LEEIFSALVD 
PLLDLNDLRT EGTTIFLQLL GRGYIESQGH LRWFITTHYG QHLDTFVKAV SASAPHIPPA 
EMFWRLHFTL GTIVFTMASA DALNDIAAAE FGEHNDIEAV IRKVIPYMAA GVSVPVASK