Gene SO_2486 details

Gene Information

• Locus tag: SO_2486
• Symbol: eda
• ID: 1170199
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 2607905
• End bp: 2608546
• Gene Length: 642 bp
• Protein Length: 213 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 637344315
• Product: keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase
• Protein accession: NP_718073
• Protein GI: 24374030
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase
• TIGRFAM ID: [TIGR01182] Entner-Doudoroff aldolase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTGAGA ATAACTGGTC ATTACAACCA CAAGATATTT TTAAACGCAG CCCTATTGTT 
CCTGTTATGG TGATTAACAA GATTGAACAT GCGGTGCCCT TAGCTAAAGC GCTGGTTGCC 
GGAGGGATAA GCGTGTTGGA AGTGACATTA CGCACGCCAT GCGCCCTTGA AGCTATCACC 
AAAATCGCCA AGGAAGTGCC TGAGGCGCTG GTTGGCGCGG GGACTATTTT AAATGAAGCC 
CAGCTTGGAC AGGCTATCGC CGCTGGTGCG CAATTTATTA TCACTCCAGG TGCGACAGTT 
GAGCTGCTCA AAGCGGGCAT GCAAGGACCG GTGCCGTTAA TTCCGGGCGT TGCCAGTATT 
TCCGAGGTGA TGACGGGCAT GGCGCTGGGC TACACTCACT TTAAATTCTT CCCTGCTGAA 
GCGTCAGGTG GCGTTGATGC GCTTAAGGCT TTCTCTGGGC CGTTAGCAGA TATCCGCTTC 
TGCCCAACAG GTGGAATTAC CCCGAGCAGC TATAAAGATT ACTTAGCGCT GAAGAATGTC 
GATTGTATTG GTGGCAGCTG GATTGCTCCT ACCGATGCGA TGGAGCAGGG CGATTGGGAT 
CGTATCACTC AGCTGTGTAA AGAGGCGATT GGCGGACTTT AA 

 

Protein sequence

MLENNWSLQP QDIFKRSPIV PVMVINKIEH AVPLAKALVA GGISVLEVTL RTPCALEAIT 
KIAKEVPEAL VGAGTILNEA QLGQAIAAGA QFIITPGATV ELLKAGMQGP VPLIPGVASI 
SEVMTGMALG YTHFKFFPAE ASGGVDALKA FSGPLADIRF CPTGGITPSS YKDYLALKNV 
DCIGGSWIAP TDAMEQGDWD RITQLCKEAI GGL