| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2433 |
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| Symbol | aspS |
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| ID | 1170146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2541563 |
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| End bp | 2543338 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637344264 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | NP_718023 |
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| Protein GI | 24373980 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAGTC ATTATTGTGG AGACGTCAAT AAGTCTCACG TTGGACAAGA AGTTACCTTG
GTAGGTTGGG TTAATCGTAG CCGTGATTTG GGTGGCGTTG TCTTTTTAGA TTTAAGAGAC
AGAGAAGGTC TGGTCCAAGT GGTTTATGAT CCAGATTTAC CAGAGGTGTT CAATGTGGCT
AGCACACTGC GCGCTGAGTT TTGTGTGCAG GTAAAAGGTG TGGTTCGTGC CCGTCCTGAT
AGCCAAGTTA ACGCGCAAAT GAAAACTGGC GAAATTGAAG TGTTAGGTAA AGCACTGACT
ATTATCAACA GTTCAGAGCC GTTGCCGCTG AGCTTGGATA ACTATCAAAA CAACAGTGAA
GAGCAGCGTT TAAAATATCG TTATTTAGAT TTACGTCGCC CAGAAATGGC GCAGCGCTTA
ATGTTCCGCG CGAAAGTGAC CAGTGCAGTG CGTCGTTTCC TCGACTCAAA CGGTTTCTTA
GATATAGAAA CGCCGATCCT GACCAAGGCA ACCCCAGAAG GTGCCCGTGA CTATTTAGTG
CCGAGTCGTA CTTACAAAGG TCAATTTTTT GCCCTGCCAC AATCGCCACA GCTATTCAAA
CAGCTGCTGA TGATGTCAGG TTTTGATCGT TACTATCAAA TCGTAAAGTG CTTCCGTGAC
GAAGACTTAC GTGCTGATCG TCAGCCAGAA TTCACCCAAA TCGATATCGA AACCTCATTT
ATGACGTCTG AGCAAGTGAT GAATAAGACC GAAGAAATGA TGCGTGGTCT GTTCCTTGAG
ATGCTGAACG TTGATTTAGG CGAGTTCCCG CGTATGACCT ACAACGAAGC CATGCGTCGT
TTTGGTTCAG ACAAGCCCGA TTTACGTAAC CCATTAGAGC TGGTGGACGT TGCCGATTTA
CTCAAAGACG TTGAATTTGC GGTATTCTCA GGTCCAGCCA ATGACGAAGA AGGTCGTGTT
GCGGCGCTGC GTATTCCTGG CGGTGCAAGC CTGTCTCGTA AGCAAATCGA CGATTATACT
AAGTTTGTTG GCATCTACGG CGCCAAGGGC TTAGCGTGGA TGAAGCTTAA CGATCTGACT
CAAGGCTTAG AAGGCATTCA ATCACCTGTG CTTAAGTTCT TGAATGAGAA CATTGTTAAC
GAAATCATCA ACCGCACTGG CGCACAAACT GGCGATATTA TCCTGTTTGG TGCAGATCAG
GCGACAGTGG TTGCTGAATC GATGGGCGCA CTGCGTCTTA AAGCGGGTGA AGACTTTAAT
CTGCTTGAAG GTCAATGGCG TCCACTATGG GTGGTTGACT TCCCGATGTT TGAGAAGATC
AACGGTAGCT TCCACGCGGT TCACCATCCA TTTACTGCGC CGCGTGGCGT GACACCTCAA
GAGCTAGAAG CCAATCCTGC TAACCGCGTC TCAGATGCCT ACGACATGGT ATTAAACGGC
TGCGAATTAG GCGGTGGTTC GGTACGTATC CACAACCAAG AAATGCAATC TGCGGTATTC
CGCATTCTGG GCATTACCGA TGAAGAAGCG AAGGAAAAAT TCGGCTTCTT ACTCGAAGCG
CTGCGTTATG GTACACCGCC ACATGCAGGT TTAGCCTTTG GTTTAGACCG CATCATCATG
TTGATGACGG GCGCAAGCTC AATCCGTGAT GTGATGGCGT TCCCGAAAAC TACCACAGCT
GCATGTCCGT TAACCAATGC CCCAGGTTTT GCTAACCCAC AACAATTAGC AGAATTAGGC
ATTGCAGTGG TAAAAACTGC GAAGACTGAA GACTAA
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| Protein sequence | MRSHYCGDVN KSHVGQEVTL VGWVNRSRDL GGVVFLDLRD REGLVQVVYD PDLPEVFNVA
STLRAEFCVQ VKGVVRARPD SQVNAQMKTG EIEVLGKALT IINSSEPLPL SLDNYQNNSE
EQRLKYRYLD LRRPEMAQRL MFRAKVTSAV RRFLDSNGFL DIETPILTKA TPEGARDYLV
PSRTYKGQFF ALPQSPQLFK QLLMMSGFDR YYQIVKCFRD EDLRADRQPE FTQIDIETSF
MTSEQVMNKT EEMMRGLFLE MLNVDLGEFP RMTYNEAMRR FGSDKPDLRN PLELVDVADL
LKDVEFAVFS GPANDEEGRV AALRIPGGAS LSRKQIDDYT KFVGIYGAKG LAWMKLNDLT
QGLEGIQSPV LKFLNENIVN EIINRTGAQT GDIILFGADQ ATVVAESMGA LRLKAGEDFN
LLEGQWRPLW VVDFPMFEKI NGSFHAVHHP FTAPRGVTPQ ELEANPANRV SDAYDMVLNG
CELGGGSVRI HNQEMQSAVF RILGITDEEA KEKFGFLLEA LRYGTPPHAG LAFGLDRIIM
LMTGASSIRD VMAFPKTTTA ACPLTNAPGF ANPQQLAELG IAVVKTAKTE D
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