Gene SO_2430 details

Gene Information

• Locus tag: SO_2430
• Symbol: ruvA
• ID: 1170143
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 2539276
• End bp: 2539893
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637344261
• Product: Holliday junction DNA helicase RuvA
• Protein accession: NP_718020
• Protein GI: 24373977
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0632] Holliday junction resolvasome, DNA-binding subunit
• TIGRFAM ID: [TIGR00084] Holliday junction DNA helicase, RuvA subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAGGTC GTTTACGTGG CGTATTAATT GAAAAACAAG CGCCAGAGGT GTTGATTGAT 
GTAAACGGGG TCGGTTACGA ATTGCAAATG CCGCTGACCA GCTTTTATGA ACTCCCAGAG 
CTCAATCAAC CGACCACGGT TTATACCCAT TTTGTGGTGC GTGAAGATGC CCAGCTGCTC 
TACGGTTTTA TCACCAAACA GGAGCGTTCA CTGTTTCGCT TATTGATTAA GGCTAACGGT 
GTTGGTCCAA AACTCGCCTT AACGATTCTT TCTGGCATGA CGGCCAGTGA ATTTGTGGGC 
TGTGTTGAGC GTGATGATAT AGTAACACTG GTAAAATTAC CCGGTGTTGG TAAAAAAACC 
GCCGAGCGAT TGTTGGTGGA AATGCGCGAT AAACTCAAGA GCCTGATGGA GGCGTCAGTA 
GGCTCCGAGC GTGAGTTTGT ATTGCAATCC AACTATTCAC CGGCTCCTGT GGTGAATAGT 
GCCGAAGAGG ATGCCATTTC TGCATTAATT TCTTTGGGTT ACAAACCCCC ACAGGCCAGC 
AAAGCGGTTT CAGCTGCTTT TAAAGAAGGC ATGGACAGTG AGACTTTGAT TAAGGCCGCG 
TTAAAATCGA TGCTCTAA 

 

Protein sequence

MIGRLRGVLI EKQAPEVLID VNGVGYELQM PLTSFYELPE LNQPTTVYTH FVVREDAQLL 
YGFITKQERS LFRLLIKANG VGPKLALTIL SGMTASEFVG CVERDDIVTL VKLPGVGKKT 
AERLLVEMRD KLKSLMEASV GSEREFVLQS NYSPAPVVNS AEEDAISALI SLGYKPPQAS 
KAVSAAFKEG MDSETLIKAA LKSML