| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2427 |
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| Symbol | |
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| ID | 1170141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2534781 |
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| End bp | 2537342 |
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| Gene Length | 2562 bp |
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| Protein Length | 853 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637344259 |
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| Product | TonB-dependent receptor, putative |
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| Protein accession | NP_718017 |
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| Protein GI | 24373974 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAAAA GAACCAAAGT GGCGTCGGCT ATTAATTTAG CAGTCGTTAG CTCAATTGCT
GCGGGTGCCT TTGTTGCATC AAGCGCATTT GCGGCTGAAG AGACAGCAAA AGTTGAACGT
ATTGAAGTGA CGGGTTCACG TATTCAACGT CAAGATATGG AAACAGCTTC TCCTGTTACC
GTTATTGATG CTGCAGCAAT TAAAGCTGAA GGCTTTACCT CTGTAGACCA AATGCTACAA
GTTCAAACCT CAATGGCGGG TGCGGCTGTA GGTTCAACCA CCAACAATGG TGCAGACGGT
GTTGCGCAGG TTGACCTACG TGGTATGGGT TCTCAACGTA CTCTCGTACT ATTAAATGGT
CGTCGTATGG TGAACTCTGG TTCAGGTGCT GACAGCGCTG TGGACTTAAA CTCAATCCCA
GTCGCGATGA TCGCTCGCGT TGAAATCCTG AAAGATGGCG CTTCAGCAGT ATACGGTTCT
GATGCGATTG CTGGTGTAGT GAACATCATC ACTAAGAAGG ACTTTGAAGG CTTCCAGTTT
GATATGAACG GTAGCGGAAC CGATAAAGGC GATGGTCAAA GCGGTGATGT CAGCGCACTG
TATGGTTTTA ACACCGATGG TGGTAACTAC ACATTTGGTG CCGCATATTC TGACCGTCGT
GGAGTGATCC AAGGCGACCG TGATTGGTAT GACCCACTGG ATAACACTAG CTCAATTATT
CCAACTGGTA CATTAAATCA AAAAGTCATT GATGCCAATG GTAATTGGGT TAAGAGAACA
GAGACCTATG ACTACTCAAA TGACGTCTAT TTCCAAACAC CGAGTGAACG TCGGAGTTTA
TTTGCAAATA TGACGCAGGA GCTAGGCAAT GATGTGGTGC TGACTGCCGA CGCTATCTAT
ACCAATCGCC GTTCTAACCA ACAACTTGCG GCACAACCTG CTCAAATCAA GCTAAACGTG
TGTGGTGACC CAAGAGTCCA AGATCCAACA GCAGGTTGTC TTACCCTTGA CCAAGGTATG
ATTGATGCTG GGATTAAAGC AGATGCTCGT GGACAAGTCC AATACAACAG ACGTATGAAT
GATGTAGGTC CTCGTATTTA CAATCAAGAC ACTGATACTT GGCGTCTATC TGCTGGCTTA
GCGGGCTCTT TAGACGTTCA TACTGGTATG AATTGGAATG TGGATTACAC CTTTGGTAAG
AACGAAGCCA AAACTGGTGT TGATAACTCA ATTAACGCAA CATTAATGGC TAATTCAATC
TATGCAGATC CATATGCTTG GTTTGAAGGT TCCCCTTTGA CTGATGACAT GAAGGATGTT
TCTTATCAAC AGCAATCAAC CGGTGGCAAC GAACAACAAA CGCTGTCAGC AGGCTTAAAT
GGTGAGCTAT TTGACCTAAG CGCTGGTGCT GTAGGTTTCG CGATTGGTGC AGAATACCGC
CGTGAGAGTG GTTTTTATAA TCCCGATCCA GTTGTCGTTG CTGGTGATAG TACTGCCGCG
CAGCAAGATC CAACAAGTGG TAACTATAAT GTTATCTCTA TTTTCGAAGA AGTGAGTGTA
CCGTTTACTG AAAAATTAAC GGGTGAATTT GCACTGCGTT TAGATGATTA CTCAACCTTC
GGTAAAGCAA CCACGTGGAA AATTGGTTTA ACTTATACAG CAACGGATGA GCTAATGGTC
CGTACTGTGG CCGCTACTGG TTTCCGAGCG CCAAGCGTTG CTGAACTCTA CGGTGGTAAC
TCAGGATCTT TTGACTATTT AACGAATCCT TGGTTACCGG CTAGTGAACA AACAGGTCAG
ATTTTAGTTA ATCGTACATC AGATCCAGAT TTAAAGCCTG AAGAGTCTGA GTCATACACT
GCTGGTTTAG TATATTCTCC AAGTTATATT GATGGCATGT CAATTACTCT TGACTACTGG
CGTTTCAAAG TAACTGATGC CATTGCTCGT GCAGACGTGC AAGTTGGATT AGATGCTTGT
CATGCTGGTG ATGCAGAAGC GTGTAGCACA TTCAATATTA CTGCGGATGG TGACTTATTC
AACTTGACAA GTGCGCTGAC TAACGTAGGT TCACAAGACA CTAGCGGTAT CGACTTCAAC
TTAGCCTATA ACTTCGAGTT ATTTGGATTA GATTGGAAAG TGAGTAACGA TACTACTTAC
TTGATTAAGT TCGAGCAGGA TGGTGAAAAC TATACTGGTA CAATCGACGG TAATATGGGA
GCTTATGCTC GCGTTCGTAA CAACTTCAGC ATCTCTGCAG GTCAAGATGA TTGGAGCGTA
ATGTACTTCA ACCGCTATAT CAGATCGATG ACAGATGTTT ACACTGATTA TGATGCAAAC
GACAATCCAT TCGTTGCTGT AAGAGGTGTT GATTCAATTC TGTATCACAA CATTTCTGGC
ACCTATCATG TATCTGATAA CACCACTGTT AGTTTAGGTG TGAAGAACTT GACTGATGAG
AAGCCTCTAT ACGTTACTAA CGGTAGTGAC GCAGGAACAG TTCCACAAGT TTACGACACA
GTTGGTCGTA CCATTTATGG TGGTGTGACT GTTAAGTTCT AA
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| Protein sequence | MIKRTKVASA INLAVVSSIA AGAFVASSAF AAEETAKVER IEVTGSRIQR QDMETASPVT
VIDAAAIKAE GFTSVDQMLQ VQTSMAGAAV GSTTNNGADG VAQVDLRGMG SQRTLVLLNG
RRMVNSGSGA DSAVDLNSIP VAMIARVEIL KDGASAVYGS DAIAGVVNII TKKDFEGFQF
DMNGSGTDKG DGQSGDVSAL YGFNTDGGNY TFGAAYSDRR GVIQGDRDWY DPLDNTSSII
PTGTLNQKVI DANGNWVKRT ETYDYSNDVY FQTPSERRSL FANMTQELGN DVVLTADAIY
TNRRSNQQLA AQPAQIKLNV CGDPRVQDPT AGCLTLDQGM IDAGIKADAR GQVQYNRRMN
DVGPRIYNQD TDTWRLSAGL AGSLDVHTGM NWNVDYTFGK NEAKTGVDNS INATLMANSI
YADPYAWFEG SPLTDDMKDV SYQQQSTGGN EQQTLSAGLN GELFDLSAGA VGFAIGAEYR
RESGFYNPDP VVVAGDSTAA QQDPTSGNYN VISIFEEVSV PFTEKLTGEF ALRLDDYSTF
GKATTWKIGL TYTATDELMV RTVAATGFRA PSVAELYGGN SGSFDYLTNP WLPASEQTGQ
ILVNRTSDPD LKPEESESYT AGLVYSPSYI DGMSITLDYW RFKVTDAIAR ADVQVGLDAC
HAGDAEACST FNITADGDLF NLTSALTNVG SQDTSGIDFN LAYNFELFGL DWKVSNDTTY
LIKFEQDGEN YTGTIDGNMG AYARVRNNFS ISAGQDDWSV MYFNRYIRSM TDVYTDYDAN
DNPFVAVRGV DSILYHNISG TYHVSDNTTV SLGVKNLTDE KPLYVTNGSD AGTVPQVYDT
VGRTIYGGVT VKF
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