Gene SO_2424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2424 
Symbol 
ID1170139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp2532591 
End bp2533718 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content46% 
IMG OID637344257 
Productzinc carboxypeptidase domain-containing protein 
Protein accessionNP_718014 
Protein GI24373971 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2866] Predicted carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGATCA GTGCCAATTT TGATGGCGGA AATATCCAAG TCATCAATCT TGATAATAAA 
GACGATATTC AACTGGCGAT CCGTCCCGAT GCGGGCGGTG AGTTTTATCA ATGGTTTAAC 
TTCAGATTCG AAGGTGAGGT GGGTAATCAT TACACCTTAA ATATCATCAA TGCTGGTACG 
GCTTCCTATC CTAAAGGCTG GCAGGATTAC TACGCGGTTG CCAGTTATGA TCGTCAACAT 
TGGTTCCGTG TACCAACTCA ATATATTGAT GGCAAGCTAA GTATTCAGCT CGAACTGGAT 
TGTGATGCGA TTCAAATCGC CTACTTTGCG CCGTACAGCT ATGAGCGCCA TTTAGATTTA 
CTCAGCAACG CGCAATTGCA TCCCGATGTG AATCTAGAGC ATTTAGGCTT AACCTTGGAT 
GGCCGTGATA TCACCTTGAT GAAAGTCGGT GATGGCAATC CAGACAAGCG CAATATTTGG 
ATCACAGCAA GACAACATCC CGGCGAGACT ATGGCGGAAT GGTTAGTTGA AGGGTTGGTT 
AATCGCCTGC TTGATAATGA TTGCCCAACA GCTAAGGCAT TGCTTGATAA AGCAAACTTT 
TTCATTGTAC CCAATATGAA CCCCGATGGT AGCGTTAGAG GTCATCTACG AACTAATGCG 
ATTGGTGTGA ACCTTAACCG CGAATGGCAA ACGCCGAGTT TAGAAAGAAG CCCAGAGGTG 
TACCAAGTCG TGCATAAAAT GCAGCAAACC GGCGTGGATT TATTCTACGA TGTCCACGGT 
GACGAAGGTC TGCCTTATGT GTTCCTCGCG GGTTGCGAAG GGGTGCCCGG TTACAGTGAC 
AGATTGGGGC AACTGCAAGC CGATTTTAGT CAGGCATTGA CCCTTGCGAG CGCCGATTTC 
CAAACCGAAT TTGGTTACGC CAAAGATGAA CCTGGTCAAG CCAACCTAAC TGTGGCGTCG 
AATTGGGTAG CGCAAAACTT CGATTGTTTA TCCAATACCC TTGAAATGCC ATTTAAAGAC 
AACAACAACC TGCAAGATCC TTTTGTGGGT TGGTCTCCTG AGCGCAGCAT TTACTTAGGC 
GAAGCCTCAT TAATTGCCAT GCTCGCTGTG GTAGATAAGT TAAGATAG
 
Protein sequence
MRISANFDGG NIQVINLDNK DDIQLAIRPD AGGEFYQWFN FRFEGEVGNH YTLNIINAGT 
ASYPKGWQDY YAVASYDRQH WFRVPTQYID GKLSIQLELD CDAIQIAYFA PYSYERHLDL 
LSNAQLHPDV NLEHLGLTLD GRDITLMKVG DGNPDKRNIW ITARQHPGET MAEWLVEGLV 
NRLLDNDCPT AKALLDKANF FIVPNMNPDG SVRGHLRTNA IGVNLNREWQ TPSLERSPEV 
YQVVHKMQQT GVDLFYDVHG DEGLPYVFLA GCEGVPGYSD RLGQLQADFS QALTLASADF 
QTEFGYAKDE PGQANLTVAS NWVAQNFDCL SNTLEMPFKD NNNLQDPFVG WSPERSIYLG 
EASLIAMLAV VDKLR