| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2406 |
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| Symbol | aspC-2 |
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| ID | 1170122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 2509451 |
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| End bp | 2510641 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637344240 |
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| Product | aromatic amino acid aminotransferase |
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| Protein accession | NP_717996 |
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| Protein GI | 24373953 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1448] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAACT CACTCATCGC AATGCCTGCG GATCCGATCC TTGGCTTGTT GACCCAGTAC
CGCGAAGACA CACATCCACA GAAAGTAGAC TTAGGTGTCG GCGTTTATAA AGATCCCGCG
GGAAACACCC CCATTCTCAA TTGTGTAAAA AAAGCCGAGA AATTTCGTTT AGAAACCGAG
ACGACAAAGG TCTATATCGG TCCAACTGGT TCGCCTCAGT TTAATACCCT GATGACAGAG
TTAGCCTTTG GCAGTGATCA TAGCGCGATT ATCGCTAACC GTATTCGTAC TGTTTCCACA
CCTGGCGGTA CGGGCGCTCT GCGTGTTGCG GGTGACTTTA TTAAGCGTTG CAATCCTAAT
GCGGTGTTGT GGGTAAGCGA TCCCACATGG GCTAATCATA CAGGTTTATT CGAAGCTGCT
GGGATCACAG TTAAAACTTA TCCCTATTAT GACTACGATA GTAAATCGTT GAAATTTGAC
GAGATGCTTG CTGCATTATC GCAAGTGAGT CCTGATGACG TAGTGTTATT ACACGCCTGC
TGCCATAACC CAAGTGGGAT GGATTTGACC ACTGATCAAT GGGATAAAGT CGTCACCCTC
ACCAAAGAGC AAGGTTTTAC CCCGCTTATC GACATGGCTT ACCAAGGTTT TGGTGACGGT
GTCGATATCG ATGCCTACGG CGTGCGTAAA ATGGCTGCAG CGGTCGATAA TATGATCCTG
TGTAGCTCTT GCTCGAAGAA CTTCGGTCTG TACCGTGAGC GTATCGGTTC CTGCTCTGTG
GTTGCAAAGG ATGCGAACAC GGCAAACATT GCGCAATCTG TACTGCTTTA TGTGGTTCGC
TGCCTCTACT CTATGCCACC TGCCCATGGC GCGGCGATTG TTGAGACGAT TTTAGGATCA
AAAGAATTAA CCCAAGAATG GCTTGATGAG CTCAAAGTGA TGCGCGACCG TATCAATGGT
AACCGCGCGA TTTTAGTTGA AAAACTCAAA GCCAATGGTG TTGCTCGCGA CTTTAGCTTT
ATTGCTCGCC AAAAAGGCAT GTTCTCTTTC CTTGGTGTAA ATCCTGAGCA AGTGGCGCGT
CTGCAAAAAG AATTTAGCAT CTACATGGTG GGTTCAAGCC GGATCAGTAT CGCGGGGATC
AGTGAAGATA ACGTCGATTA TCTCGCCCAA TCGATCGCCA AAGTGCTTTG A
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| Protein sequence | MFNSLIAMPA DPILGLLTQY REDTHPQKVD LGVGVYKDPA GNTPILNCVK KAEKFRLETE
TTKVYIGPTG SPQFNTLMTE LAFGSDHSAI IANRIRTVST PGGTGALRVA GDFIKRCNPN
AVLWVSDPTW ANHTGLFEAA GITVKTYPYY DYDSKSLKFD EMLAALSQVS PDDVVLLHAC
CHNPSGMDLT TDQWDKVVTL TKEQGFTPLI DMAYQGFGDG VDIDAYGVRK MAAAVDNMIL
CSSCSKNFGL YRERIGSCSV VAKDANTANI AQSVLLYVVR CLYSMPPAHG AAIVETILGS
KELTQEWLDE LKVMRDRING NRAILVEKLK ANGVARDFSF IARQKGMFSF LGVNPEQVAR
LQKEFSIYMV GSSRISIAGI SEDNVDYLAQ SIAKVL
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