Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2399 |
Symbol | |
ID | 1170116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 2503170 |
End bp | 2504330 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637344234 |
Product | tetratricopeptide repeat protein |
Protein accession | NP_717989 |
Protein GI | 24373946 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTGAGA TCCTCTTCCT GTTGCTCCCA ATAGCTGCCG GTTACGGTTG GTATATGGGA CGGCGGAGTA TAAGGCAAAA TCAGAGTAAT CAGCGTAAAC AATTAAGTCG TGATTATTTC ACTGGCTTGA ATTTCCTGTT GTCTAACGAG TCGGACAAAG CGGTCGACTT GTTTATCAGT ATGCTCGATG TGGACGATGA AACCATCGAT ACCCATCTGT CCCTCGGTTC TTTATTCCGT AAGCGCGGTG AAGTTGACCG CTCGATTCGT ATTCACCAAA ACTTAATTGC CCGCCCAACA TTGACCAATG AACAGCGCGA TATCGCCATG ATGGAGCTGG GCAAAGACTA TCTTGCAGCG GGATTTTATG ATCGCGCCGA GGAAATTTTT CTAAATTTAG TCAGTCAAGA TGACCATAGC GAAGAGTCAG AGACACAATT AATTGCGATT TACCAAGTGA TTAAGGAATG GCAAAAGGCT ATCGATATCA CCAAACGTTT AAGCCGTAAA CGGCAGCAGG TGCTCAAACC GATTACAGCA CATTTTTATT GTCAGCTTGC CGATGAAACC AGCGATGATG CAGAGAAGAT CAAGTTACTG CAGCAAGCCC TAAAACAAGA TCCCAAATGT GGCCGCGCCT TATTGACCCT TGCCAAGAAA TTCCTCGATG CGAAGGATTA CAGCCAGTGT AAATCCATGC TTATAGCCTT AAAAAAGGCT GATATTGAGC TTTTTGCCGA TGCATTACCG ACGGCGAAAC AAGTGTATCG CGATACCCAA GATAAAGAGG GCTATCAAGA GTTATTGGCA GGCGCTATGG CTGAAGGCGC TGGTGTATCC GTGGTGGTTG CGCTTGCCCA ACATATGATA AGCCTTGATG AGATAAAAGC CGCCGAAAAC ATGGTGCTGG ATGCGCTGTA TCGCCATCCT ACCATGAAGG GCTTTCAGCA CTTAATGCAG ATGCATTTAC GCCAAGCAGA AGAAGGGCAA GCCAAACAAA GTTTGACTAT GCTTGAGCAA CTTGTTGAAC AACAAATTAA ATTCCGTCCA AGCTATCGCT GTAAAGAATG TGGTTTTCCA TCCCATACGC TGTATTGGCA TTGTCCTTCT TGCAAAAAAT GGGGCACCAT TAAACGGATA CGAGGATTGG ACGGTGAATA A
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Protein sequence | MLEILFLLLP IAAGYGWYMG RRSIRQNQSN QRKQLSRDYF TGLNFLLSNE SDKAVDLFIS MLDVDDETID THLSLGSLFR KRGEVDRSIR IHQNLIARPT LTNEQRDIAM MELGKDYLAA GFYDRAEEIF LNLVSQDDHS EESETQLIAI YQVIKEWQKA IDITKRLSRK RQQVLKPITA HFYCQLADET SDDAEKIKLL QQALKQDPKC GRALLTLAKK FLDAKDYSQC KSMLIALKKA DIELFADALP TAKQVYRDTQ DKEGYQELLA GAMAEGAGVS VVVALAQHMI SLDEIKAAEN MVLDALYRHP TMKGFQHLMQ MHLRQAEEGQ AKQSLTMLEQ LVEQQIKFRP SYRCKECGFP SHTLYWHCPS CKKWGTIKRI RGLDGE
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