| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2380 |
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| Symbol | |
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| ID | 1170099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2482458 |
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| End bp | 2484422 |
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| Gene Length | 1965 bp |
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| Protein Length | 654 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637344217 |
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| Product | RecQ domain-containing protein |
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| Protein accession | NP_717970 |
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| Protein GI | 24373927 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTATT CAGCGTCTCA GCCTGACGAA GGCTCAGCTT TAATCTCACG ATTACAGCAA
CAATTTGGTT TTTCAGAATT TAGACCGGGC CAAGGTGAGG TTATCACTCA GCTATTAGCG
GGCCAATCGA GCCTGGCGAT ATTTCCAACG GGCTCAGGAA AATCACTCTG TTACCAATTT
ACCGCGCTTC AGCTTCCCCA TTTAACCTTA GTGGTTTCAC CTTTGTTGGC CTTGATTAAA
GATCAATTGA ATTTCTTGCA ACAGAAGGGC ATTAAAGCGG CAAGTATCGA CTCAACTTTA
ACGCCAGAAC AGACCCAACA GGTCATGCGA GAGGCGCGTT CAGGCCAGTT AAAATTGTTG
ATGGTGTCAG TTGAACGCTT CAAAAATGAA CGTTTTCGGC AGTTTATTCA ATCTATTCCA
CTATCAATGC TGGTTGTGGA TGAAGCCCAC TGTATCTCCG AATGGGGGCA TAATTTTCGT
CCCGATTATT TGAAATTACC CGATTATTGC CGTGAGTTAT CGATTCCGTT AGTGCTGTTA
CTCACCGCTA CCGCAACGCG AAAAGTCAAA CAGGATATGG CGATTCGTTT CGATATAAAG
CCACAACACA TTGTGCAAAC AGGTTTTTAT CGGTCAAATC TTGATTTAAC AGTGCTACCT
GTTGCCAGTG AAAATAAATT ACGAATACTC AAGCAACAAC TACAAAGTTT TGATGGTGCG
GGGATTGTCT ATGTGACGTT GCAGCATACA GCGGAAGAAG TTGCATCACA ACTTTGCAGC
ATGGGCTTTG TTGCTCAGGC TTACCATGCG GGGTTTGATG ATGATAAACG TCAGCAAATT
CAGCATGATT TTATGCTAGG TCAGACTCAA ATCGTCGTTG CAACCATCGC CTTTGGCATG
GGGATTGATA AAAGCAATAT CCGTTTTGTG ATCCACTATG ACTTACCTAA ATCCATCGAA
AACTACTGCC AAGAAATTGG TCGCGCAGGG CGTGATGGGC AACTTTCCCA TTGCGTTACC
TTAGCTAATT TGGATGGTAT CAACACTGTA GAAAACTTTG TGTATGGCGA CACACCGGAG
CTAGCAAGTA TTGCCACCGT GATTGACAGC ATTAGCCAAG AAACCCAAGC TAATTATTGG
GAAGTGCAAC TGAATCAGTT AGCCAATCAG AGTAATATTA GATTGCTGCC ACTTAAGACT
CTTCTGGTAC AGCTTGAACT TCAGGGCGTG ATCAAACCGC TTTATGCCTA CTACGCTGAT
GTTCAATATC GATTTCTCCA ACCTCAAGCG CACGTATTAA GTCAGTTTTC ACCTGAGCGT
CAGGCATTTT TAACCCAAAT ATTTACGCAC ACCCAAATGA AACGTGTTTG GGGAAGTTTA
GATTTTAATG CGCTTTATCA GGCCACGGGA GCTGAACGCA ACCGCGTGTT GGCGGCCTTA
GAATACCTTG CAAGTCAGCA ACTCATTGAA TTAGAAACCA AGCAAATTAC CGATGTATAT
CAGGTGGAAA CCGTCAAATT GTCTACGCCC ACGTTAGCAA AAGATCTCTA TCACTATTTT
GCCGATAAGG AAGCCAAAGA AGTGGCTAGG ATTGCCCAAT TAGTGCGATT CTTTGAGCTA
ACAACTTGCT TAAATTACAA TTTAGCGCGC TATTTTGACG ATAATGCAGC ACCTAAATCC
TGCGGTCATT GCAGTGTTTG TCGCGGTCAA GTGGCCAAAC TCACGTATTC CAATACGCCA
ATTTGGCCAG AGGATCAGCG TATTTGTGCC GATCTTAACG AACTTAACCA ACTCGTTAGA
AGTAAAGGTA TGGTGCCACT TTCCCTTGAA ACCCAATGCC GCTTTTTAGC GGGAATGAGT
CTGCCGATCT TCACCCGTTT ACAAGTGCGT AAACTTGCAG GTTTTGGTCG CTGCGAAAAT
TTAAGGTATG CCGAAATAAA ACAAAGATTA CAACATTTGA TTTAA
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| Protein sequence | MSYSASQPDE GSALISRLQQ QFGFSEFRPG QGEVITQLLA GQSSLAIFPT GSGKSLCYQF
TALQLPHLTL VVSPLLALIK DQLNFLQQKG IKAASIDSTL TPEQTQQVMR EARSGQLKLL
MVSVERFKNE RFRQFIQSIP LSMLVVDEAH CISEWGHNFR PDYLKLPDYC RELSIPLVLL
LTATATRKVK QDMAIRFDIK PQHIVQTGFY RSNLDLTVLP VASENKLRIL KQQLQSFDGA
GIVYVTLQHT AEEVASQLCS MGFVAQAYHA GFDDDKRQQI QHDFMLGQTQ IVVATIAFGM
GIDKSNIRFV IHYDLPKSIE NYCQEIGRAG RDGQLSHCVT LANLDGINTV ENFVYGDTPE
LASIATVIDS ISQETQANYW EVQLNQLANQ SNIRLLPLKT LLVQLELQGV IKPLYAYYAD
VQYRFLQPQA HVLSQFSPER QAFLTQIFTH TQMKRVWGSL DFNALYQATG AERNRVLAAL
EYLASQQLIE LETKQITDVY QVETVKLSTP TLAKDLYHYF ADKEAKEVAR IAQLVRFFEL
TTCLNYNLAR YFDDNAAPKS CGHCSVCRGQ VAKLTYSNTP IWPEDQRICA DLNELNQLVR
SKGMVPLSLE TQCRFLAGMS LPIFTRLQVR KLAGFGRCEN LRYAEIKQRL QHLI
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