Gene SO_2375 details

Gene Information

• Locus tag: SO_2375
• ID: 1170094
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 2480289
• End bp: 2480948
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637344212
• Product: hypothetical protein
• Protein accession: NP_717965
• Protein GI: 24373922
• COG category: [R] General function prediction only
• COG ID: [COG0670] Integral membrane protein, interacts with FtsH

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTCAGC AAACCCTGTA CTCAACGAGT GCAACAACTT TAGAAGTGAA CAAACTTCTT 
AAAAATACTT ATTTATTATT GGCCATGACC CTAGCCTTCT CTGCATTATG TGCAGGTTTA 
GCGATGGCGC TCAATATCAG CCCGCTGATG TCACTTGGTT TATCTATCGG TGGTTTAGTG 
CTGCTTTTTG TCACGCTTCG GAAAGCCGAT TCAGCCGCAG GCATTTTCTG GGTGTTTGCC 
TTTACGGGCA TGGAAGGCGC CTCATTAGGC TATATGCTTA ACCATTACGC AGGAATGACA 
AACGGCTCCG AGTTGATCAT GCAAGCCTTT GGGTTAACAT CGGTCATTTT TATTGCTCTG 
TCAGCCTATG CCGTCACCAC CAAGAAGGAT TTCTCTTTCA TGCGTGGTTT CTTATTTGCA 
GGACTGATAG TAGTGATTGC TGCCGCTATT ATTAATATTT TTGTCGGTAA CAGCGTCGCG 
TTTATGGCGA TTAACGCAGG TCTGGCATTG TTGATGACAG GCTTTATTCT GTTCGATACT 
AGCCGAATCG TAAATGGCGG TGAGACTAAT TACATCCGTG CAACTATCTC CTTGTACTTG 
GACTTTTTAA ACCTGTTCAT TGCCATTTTG CATTTGCTTG GTATTGGTAA CGATGATTGA 

 

Protein sequence

MTQQTLYSTS ATTLEVNKLL KNTYLLLAMT LAFSALCAGL AMALNISPLM SLGLSIGGLV 
LLFVTLRKAD SAAGIFWVFA FTGMEGASLG YMLNHYAGMT NGSELIMQAF GLTSVIFIAL 
SAYAVTTKKD FSFMRGFLFA GLIVVIAAAI INIFVGNSVA FMAINAGLAL LMTGFILFDT 
SRIVNGGETN YIRATISLYL DFLNLFIAIL HLLGIGNDD