Gene SO_2342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2342 
SymbolnadA 
ID1170065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp2450283 
End bp2451356 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content47% 
IMG OID637344179 
Productquinolinate synthetase 
Protein accessionNP_717932 
Protein GI24373889 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0379] Quinolinate synthase 
TIGRFAM ID[TIGR00550] quinolinate synthetase complex, A subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTCCA GCTTATTTGC CCCAACAATC GAAACCATAG ATTATCCATT TCCGCCAAAA 
CCTGTGCCGC TATCTGATGC ACAAAAGGCT GATTATAAGG CACGTATCAA GCAACTGCTG
ATTGAAAAAG ATGCGGTATT AGTTGCCCAT TATTATACCG ACCCTGAAAT TCAAGCACTT
GCTGAAGAAA CCGGTGGCTG TGTTTCTGAT TCCCTCGAAA TGGCGCGCTT TGGCCGCGAT
CACCCAGCAA AAACCTTAAT CGTAGCTGGG GTGAAGTTTA TGGGGGAAAC AGCTAAAATT
TTAAGCCCTG AAAAAACCAT CCTAATGCCG ACCCTTGAAG CAACTTGTTC ATTGGATTTA
GGTTGCCCCA TCGATAAATT CAGCGCCTTC TGTGACGCCC ATCCAGATCA TACCGTGGTG
GTTTATGCCA ATACTTCTGC AGCCGTAAAA GCCCGTGCCG ATTGGGTAGT GACATCGAGC
ATTGCCCTTG AAATCGTTGA ACACTTAGAC AGTGAAGGCA AAAAAATCAT TTGGGGTCCA
GACCGCCACT TAGGCAGTTA TATTGCCAAA CAAACGGGCG CCGAAATGCT AATGTGGCAG
GGCGACTGTA TTGTACATGA TGAGTTTAAA GCGAACGCCC TGCGTGATCT GAAAAGCGTC
TACCCAGATG CGGCTATTCT TGTTCATCCA GAATCACCAG CCAGCGTAGT TGCTATGGCT
GATGCCGTTG GTTCAACCAG TCAGTTAATT AAAGCTGCGC AAACCATGCC CAATGAGCGT
TTTATTGTGG CGACCGATCG CGGTATTTTC TACAAAATGC AGCAAGCAGC ACCGGGCAAA
ACCTTAATCG AAGCGCCGAC CGGCGGTAAT GGTGCTACCT GTAAGAGCTG CGCTCACTGT
CCTTGGATGG CGATGAACGG CTTAAAGGCT ATTGAAGCGT CATTAAGTAA TAGCGACAAA
ACGACTCACG AGATCTTTGT CGATGAAGAT TTGCGAGTGA AAGCCTTAAT TCCGCTGACG
CGTATGCTCG ATTTTGCGAA GACGCTCAAT ATGAAAGTGA AGGGCAATGC CTAA
 
Protein sequence
MSSSLFAPTI ETIDYPFPPK PVPLSDAQKA DYKARIKQLL IEKDAVLVAH YYTDPEIQAL 
AEETGGCVSD SLEMARFGRD HPAKTLIVAG VKFMGETAKI LSPEKTILMP TLEATCSLDL
GCPIDKFSAF CDAHPDHTVV VYANTSAAVK ARADWVVTSS IALEIVEHLD SEGKKIIWGP
DRHLGSYIAK QTGAEMLMWQ GDCIVHDEFK ANALRDLKSV YPDAAILVHP ESPASVVAMA
DAVGSTSQLI KAAQTMPNER FIVATDRGIF YKMQQAAPGK TLIEAPTGGN GATCKSCAHC
PWMAMNGLKA IEASLSNSDK TTHEIFVDED LRVKALIPLT RMLDFAKTLN MKVKGNA