| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2329 |
|---|
| Symbol | |
|---|
| ID | 1170053 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 2438501 |
|---|
| End bp | 2439688 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637344167 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_717919 |
|---|
| Protein GI | 24373876 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4394] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAACAT CCTCCAACGC GTCCCACTGG GACATCTTTT GTACAGTGGT CGACAACTAC
GGCGACATCG GTGTCACTTG GCGCTTGGCA AAGCAGCTCG TGAATGAATA TCACATCCCC
ATCATCCTTT GGGTCGATGA CTTAAACAGT TTTTCGCATA TTCTACCGAC GCTAAATCCA
AAACTCGTCA GCCAATGTTT TAACGGCGTC ATTATCAATC ATTGGACAAC GCCGCTGGCC
GTTCCATATC TTCCCGGTAA GGTATTGATT GAAGCCTTTG CCTGTGAGTT ACCCGACGAG
GTGAAGCTGC AACTGGCTAC GCTCCATAAA ACCGCCCCGC AAGCGGTTCC TTTATGGCTA
AATTTGGAAT ATTTAAGTGC CGAGGATTGG GTTGATGGTT GCCACGGTTT ACCGTCGATG
CAAGTAAGCG GCATCAAAAA GTATTTCTAC TTTCCTGGGT TTACCCCAAA GACTGGTGGA
CTTATCTGTG AGCGCGAGCT ATTTGCCGAG CGCGATGCAT GGCAACAGGA CCCTGCGAAT
AAACTGCAAC TCTTTGAGAG TCTTGGTTTA AAAGACATTC AAGCACAAGA CAGCGTCTTT
AGCATATTTA GCTATGAAAC CGATTCATTG CCCGCGCTAT GTGAACTCTG GCAAGCAAGA
GCAAAGAACG ACGCTAAGAT CCATGCGCTG CTCCCCAAAG GTCGTAGCTT AAACAGTTTG
CAGCATCTAT TGCCCTGCCC AGTAGACGCG TTAATGCCTG GACAGCAAAT TAAGCTTGGG
GATTTGACCC TGCATATTTT GCCGATGACA GACCAACAAG GGTTTGATCG CTTACTATGG
AGCTGTGACG TTAACATTGT CCGCGGTGAA GACAGCTTTC TAAGGGCGCA ATGGGCTGCA
AAACCGTTTA TTTGGCATAT TTATCCGCAA GAAGATGATT ACCATCTCAT AAAATTAGAA
GCTTTTATCC GACTTTACTG CGATAATCTT GCCCCTGATA TTGCCGACAC TTGGTCTAAA
TTGAATTTCG CATTTAGCCA AGGTCAGCAA TCCGCCGTGA AAACTCACTG GCAAAACCTA
AATCCTGTCA GTTTGCCACT CTTGCAACAT GCTAAAGAAT GGCCAATTGA CGCAATAAAT
GCTGCAGATC TTGCAACTCG GCTAGTTCAA TTCGTGAAAA AAAGCTAA
|
|---|
| Protein sequence | MSTSSNASHW DIFCTVVDNY GDIGVTWRLA KQLVNEYHIP IILWVDDLNS FSHILPTLNP
KLVSQCFNGV IINHWTTPLA VPYLPGKVLI EAFACELPDE VKLQLATLHK TAPQAVPLWL
NLEYLSAEDW VDGCHGLPSM QVSGIKKYFY FPGFTPKTGG LICERELFAE RDAWQQDPAN
KLQLFESLGL KDIQAQDSVF SIFSYETDSL PALCELWQAR AKNDAKIHAL LPKGRSLNSL
QHLLPCPVDA LMPGQQIKLG DLTLHILPMT DQQGFDRLLW SCDVNIVRGE DSFLRAQWAA
KPFIWHIYPQ EDDYHLIKLE AFIRLYCDNL APDIADTWSK LNFAFSQGQQ SAVKTHWQNL
NPVSLPLLQH AKEWPIDAIN AADLATRLVQ FVKKS
|
|---|
| |