Gene SO_2328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2328 
Symbolefp 
ID1170052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp2437896 
End bp2438456 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content44% 
IMG OID637344166 
Productelongation factor P 
Protein accessionNP_717918 
Protein GI24373875 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) 
TIGRFAM ID[TIGR00038] translation elongation factor P 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACTG CTCATGAAGT CCGTCCAGGT AACGTGATCA TGTTTGAAGG CAGCCCATGG 
GTTGTACAGA AAACAGAAAC AACTCGTTCT GGCCGTAACG CTGCTATCGT TAAGTTAAAG
TTGAAAAACT TGCTGCTTAA CTCTGGCACC GAAACCACTT TCAAAGGTGA AGATAAGATT
GACGATATTA TCCTAGATCG TCTGGATTGT ACTTATTCTT ACTTTGCTGA TCCTATGTAC
GTGTTCATGG ATGCAGAATA CAACCAATAC GACGTAGAAG CTGAAAACTT AGGTGATGCA
GCGGCTTACA TCGTTGACGG TATGGAAGAA ACTTGCCAAG TAACTTTCTA CGATGGCAAA
GCAATTTCTG TTGAAATGCC AACGACTATT GTACGTGAAG TGATCTACAC TGAGCCGTCT
GCTCGTGGCG ATACTTCAGG TAAAGTGATG AAGCCTGCAA CTATCACCGG CGGCGGCACC
ATCAGCGTGG CTGACTTTGT TAAAGTTGGC GACAAGATCG AAATCGATAC TCGTACTGGC
GAATTCAAAA AGCGCGTTTA A
 
Protein sequence
MKTAHEVRPG NVIMFEGSPW VVQKTETTRS GRNAAIVKLK LKNLLLNSGT ETTFKGEDKI 
DDIILDRLDC TYSYFADPMY VFMDAEYNQY DVEAENLGDA AAYIVDGMEE TCQVTFYDGK
AISVEMPTTI VREVIYTEPS ARGDTSGKVM KPATITGGGT ISVADFVKVG DKIEIDTRTG
EFKKRV