| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2295 |
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| Symbol | |
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| ID | 1170020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2407398 |
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| End bp | 2408777 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637344139 |
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| Product | MATE efflux family protein |
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| Protein accession | NP_717891 |
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| Protein GI | 24373848 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACATT CAGGCTTTCA AGCCAAACGC TTAATTCAAC TCGCACTCCC TGTGTTGATT
GCCCAAGTGA CCCAAACCAT GATGGGGTTT ATTGATACTG TCATGGCGGG TCGAGTCAGT
GCTGTCGATA TGGCTGCCGT GGCAGTGGGA ACCAGTCTTT GGTTACCGGC TATTTTGTTT
GTACAAGGCC TGCTTATGGC CTTCACCCCT TTATTTGCTC ACCACAATGG GGCTAATAAT
CAAAAAGCCA TTCAACCATT AGCATTTCAA GGGGCCTATC TGGCTTTAAT CGGTGGCCTT
GGCGTGATGG TGTTTCTCGC ATCCGCGCCA CTCGTACTTA GCCATATGAA TTTAGAACCG
CAATTGTACA ACTTAACCAT AGGGTATATC GACGGTATTT TATGGGGCGC ACCCGCATTT
GTGCTTTACC AAGTACTCCG TGGTTGCAGT GAAGGGATTT CTTATACCTT GCCTACCATG
GTCATCGGTT TTGTGGGTCT AGCGGTGAAT ATTCCTGCAA ACTATATCTT TATTTATGGC
CACTTCGGGA TACCCGCTAT GGGAGGCGCG GGTTGCGGTA TCGCGACGGC ATTGGTGTTT
TGGGCCATGT TAATTGCCAT GGCGATTTAT ATGCAATTTC ATAAGAAATT TGCCGCATTA
GCGCCCTTTA GCCAATTCCA TCGTCCCGAT TTTGCCACCA TGAAAAAAAT GACCAAGCTC
GGCCTACCGA TTGCAATGGC ACTCTTTTTT GAGGTAAGCC TGTTTGCGAT CATTGCCCTC
TTATTGGCGC CCTTAGGTGC CACAGTGGTA GCAAGCCATC AAATAGCCTT AAACTTCTCT
GCTATCGTGT TTATGTTGCC ACTCTCCATT GGTATCGCAG TTTCGATTAG GATTGGTTAT
TACCTCGGCC GCGATCGTGC TGATATTTCT GCAGTGGTCG CCAAAGTCGG CTTATTGTTA
GCCCTGTCAT TAGCACTATC GACAGCGATA TTAACAGTGT TATTCCGCTT CCAAATCGCC
GAGCTTTATA ACAGTGATCC CGAAGTGGTT GTCCTTGCGG GCAGTTTGAT GCTGATGGCG
GCGCTGTATC AATTATCTGA CTCAGTACAA GTGGTCGCCG CGGGCGCGCT GCGTGGCTAC
AAAGATACCC GCAGTGCGTT TTATATCACG CTATTTTCCT ACTGGGGAAT CGGCATGAGT
TTAGGTTATA CCTTGGCCTA TACAGACTTT ATTGTACCGG CAATGGGCGC CCATGGTTTT
TGGACAGGAT TGATTGCAGG CCTCACCTCC GCGGCGCTGC TATTTTTTAT CCGCCTACGT
TATATCCAAA AACATCGCGT ACATTTAAGT CTGATTGAAG GCGACAGCGT GCACCATTAA
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| Protein sequence | MKHSGFQAKR LIQLALPVLI AQVTQTMMGF IDTVMAGRVS AVDMAAVAVG TSLWLPAILF
VQGLLMAFTP LFAHHNGANN QKAIQPLAFQ GAYLALIGGL GVMVFLASAP LVLSHMNLEP
QLYNLTIGYI DGILWGAPAF VLYQVLRGCS EGISYTLPTM VIGFVGLAVN IPANYIFIYG
HFGIPAMGGA GCGIATALVF WAMLIAMAIY MQFHKKFAAL APFSQFHRPD FATMKKMTKL
GLPIAMALFF EVSLFAIIAL LLAPLGATVV ASHQIALNFS AIVFMLPLSI GIAVSIRIGY
YLGRDRADIS AVVAKVGLLL ALSLALSTAI LTVLFRFQIA ELYNSDPEVV VLAGSLMLMA
ALYQLSDSVQ VVAAGALRGY KDTRSAFYIT LFSYWGIGMS LGYTLAYTDF IVPAMGAHGF
WTGLIAGLTS AALLFFIRLR YIQKHRVHLS LIEGDSVHH
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