Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2260 |
Symbol | suhB |
ID | 1169990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 2375506 |
End bp | 2376309 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637344107 |
Product | extragenic suppressor protein SuhB |
Protein accession | NP_717856 |
Protein GI | 24373813 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0483] Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATCCGA TGCTGACGAT TGCTGTTCGC GCTGCCCGCG CGGCCGGCCA AACTATTATG CGTGCCTACA CTGAACTTGA CCGAGTTGAA GTCAGTGCTA AAGGTATCAA CGATTTTGTT ACCAGTGTAG ACAAGGAAGC AGAAGCCGCT ATTACCTATC AAATTCGTAA ATCTTACCCT GATCACACTA TCGTGGGTGA AGAGAAAGGC GAAAACCGCG GTGAAAACAA AGACTATATT TGGATAGTCG ATCCTCTGGA TGGCACTAAC AACTTTGTTA GAGGCATTCC CCACTTCGCG GTTTCTATCG CGCTCCAATA CAAAGGCAAA ACTGAAGTTG CCGTTGTATA TGATCCAGTT CGTGAAGAAT TATTTACCGC TATCCGTGGT AAAGGCGCCA AATTAAACGA TTTCCGCATT CGCGTGACCA ATGTAAATGA ACTAGCACCA ACCATTATCG GGACAGGTTT TCCATTTAAA GCCCGTCAAC ATACCGAAAC CTATATGGCC ATTTTCGGCG AAGTGTTTGG TCATTGTTCA GACTTACGTC GCACGGGTTC TGCAGCATTA GATTTAGCCT ATGTGGCCGC AGGCCGTTTA GACGGTTTCT TTGAAATTGG CTTAAAGCCA TGGGATATCG CTGCTGGCGA TCTGTTATGT CGTGAAGCGG GTGGCACAGT CACTGACTTT ACTGGCGGTC ATAACTACTT GATCTCTGGC AATATCGTTG CGGGTTCTCC GAAAGTGACT ACCGAATTAG TAAAAACCAT GCGTCCTTTA CTAAACGAAG GCTTAAAGCG TTAA
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Protein sequence | MHPMLTIAVR AARAAGQTIM RAYTELDRVE VSAKGINDFV TSVDKEAEAA ITYQIRKSYP DHTIVGEEKG ENRGENKDYI WIVDPLDGTN NFVRGIPHFA VSIALQYKGK TEVAVVYDPV REELFTAIRG KGAKLNDFRI RVTNVNELAP TIIGTGFPFK ARQHTETYMA IFGEVFGHCS DLRRTGSAAL DLAYVAAGRL DGFFEIGLKP WDIAAGDLLC REAGGTVTDF TGGHNYLISG NIVAGSPKVT TELVKTMRPL LNEGLKR
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