Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2236 |
Symbol | crr |
ID | 1169970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 2352664 |
End bp | 2353173 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637344087 |
Product | PTS system glucose-specific transporter subunit |
Protein accession | NP_717832 |
Protein GI | 24373789 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2190] Phosphotransferase system IIA components |
TIGRFAM ID | [TIGR00830] PTS system, glucose subfamily, IIA component |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGATTTT TAAGCCGTAT AAGGCGATTA GTATCGGGAC AGCCACAACT TGCTGGTGGC ATCATGGTCT ATGCCCCGGT AAATGGGGAA ATAGTGGCCA TTGAAAAAGT CCCCGATGTC GTTTTTGCAG AAAAAATTGT GGGTGATGGA ATCGCTATCG CACCAACGGG CAGTACTATT GTTGCTCCTA TTGATGGTAC CATTGGAAAG ATTTTTGAAA CAAATCATGC ATTTAGCATT GAATCACCTC AAGGGTTAGA GCTTTTCGTT CACTTTGGTG TAGGCACTGT AGAGCTTAGA GGACGTGGTT TTAGTCGTTT GGCTGAAGAA GGTCAAGAAG TGAAGGTAGG CGATCCGATT TTGTCATTTG ATCTTGAGTA TCTTAAAGAT CAAGTGGATA GCTTACTCAC ACCCGTTGTG CTCGCCAATA TGGAAGATGT GAAGTATCTA GACAAAGCTC AGGGTAGCGT CACCGCAGGT AAAGACCCTA TTTTTACGGT ACAACTTTAG
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Protein sequence | MGFLSRIRRL VSGQPQLAGG IMVYAPVNGE IVAIEKVPDV VFAEKIVGDG IAIAPTGSTI VAPIDGTIGK IFETNHAFSI ESPQGLELFV HFGVGTVELR GRGFSRLAEE GQEVKVGDPI LSFDLEYLKD QVDSLLTPVV LANMEDVKYL DKAQGSVTAG KDPIFTVQL
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