Gene SO_2236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2236 
Symbolcrr 
ID1169970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp2352664 
End bp2353173 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content44% 
IMG OID637344087 
ProductPTS system glucose-specific transporter subunit 
Protein accessionNP_717832 
Protein GI24373789 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2190] Phosphotransferase system IIA components 
TIGRFAM ID[TIGR00830] PTS system, glucose subfamily, IIA component 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGATTTT TAAGCCGTAT AAGGCGATTA GTATCGGGAC AGCCACAACT TGCTGGTGGC 
ATCATGGTCT ATGCCCCGGT AAATGGGGAA ATAGTGGCCA TTGAAAAAGT CCCCGATGTC
GTTTTTGCAG AAAAAATTGT GGGTGATGGA ATCGCTATCG CACCAACGGG CAGTACTATT
GTTGCTCCTA TTGATGGTAC CATTGGAAAG ATTTTTGAAA CAAATCATGC ATTTAGCATT
GAATCACCTC AAGGGTTAGA GCTTTTCGTT CACTTTGGTG TAGGCACTGT AGAGCTTAGA
GGACGTGGTT TTAGTCGTTT GGCTGAAGAA GGTCAAGAAG TGAAGGTAGG CGATCCGATT
TTGTCATTTG ATCTTGAGTA TCTTAAAGAT CAAGTGGATA GCTTACTCAC ACCCGTTGTG
CTCGCCAATA TGGAAGATGT GAAGTATCTA GACAAAGCTC AGGGTAGCGT CACCGCAGGT
AAAGACCCTA TTTTTACGGT ACAACTTTAG
 
Protein sequence
MGFLSRIRRL VSGQPQLAGG IMVYAPVNGE IVAIEKVPDV VFAEKIVGDG IAIAPTGSTI 
VAPIDGTIGK IFETNHAFSI ESPQGLELFV HFGVGTVELR GRGFSRLAEE GQEVKVGDPI
LSFDLEYLKD QVDSLLTPVV LANMEDVKYL DKAQGSVTAG KDPIFTVQL