Gene SO_2122 details

Gene Information

• Locus tag: SO_2122
• Symbol: cheW-1
• ID: 1169865
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 2227537
• End bp: 2228049
• Gene Length: 513 bp
• Protein Length: 170 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637343987
• Product: purine-binding chemotaxis protein CheW
• Protein accession: NP_717725
• Protein GI: 24373682
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0835] Chemotaxis signal transduction protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACAGTC GCGCATCGCT AGCCCCTAAA CCCGAATTTA GCGCCCATGA TGAAGTCGAG 
TTTCTAAGTT TTGTGCTGGG TGAAGAACAC TATGCATTGG ATATTATGTC GGTAAAAGAA 
ATAAGAGGTT ACGAGCCTGT CACTAAAATT GCTAATGCCC CCAGTTTTAT TAAAGGGGTG 
CTTAATCTGC GTGGCGACAT CGTACCCATT GTCGATTTAC GAATGAAATT TAACGTTGGT 
ACCGTCACTT ATGATGAGTT CACGATAGTG ATCATGCTCA ATGTTTGTGA CCGCATTGTC 
GGCATTGTGG TCGATGCCGT TTCTGATGTG ATTAAACTGT CGAGTGAGGC CATTTTACCT 
GCACCGGAAT TTGGCGCCGC CTTTGATAGC CGTTACCTCA AAGGGCTCGC AACCGTCGAT 
GAAAAAATGG TTATTTTAGT CAATATTCAA GCTCTTATCA GCAGTGATGA CTTGGGGCTA 
ATGGATACAA ACAGTCTTTC TGAGCAGGAG TAA 

 

Protein sequence

MDSRASLAPK PEFSAHDEVE FLSFVLGEEH YALDIMSVKE IRGYEPVTKI ANAPSFIKGV 
LNLRGDIVPI VDLRMKFNVG TVTYDEFTIV IMLNVCDRIV GIVVDAVSDV IKLSSEAILP 
APEFGAAFDS RYLKGLATVD EKMVILVNIQ ALISSDDLGL MDTNSLSEQE