Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2098 |
Symbol | hyaB |
ID | 1169842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 2195162 |
End bp | 2196865 |
Gene Length | 1704 bp |
Protein Length | 567 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637343964 |
Product | quinone-reactive Ni/Fe hydrogenase, large subunit |
Protein accession | NP_717701 |
Protein GI | 24373658 |
COG category | [C] Energy production and conversion |
COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAGC GCGTTGTTAT CGACCCTATC ACCCGTATCG AGGGTCATTT ACGTATCGAA GTTGAAGTCG ATGAGAATAA TGTCATCAAC AAAGCATGGT CATCCTCTAC GTTATGGCGT GGTATTGAAG TCATACTGAA AGGCCGTACG CCCATGGACG TGGGTCTGAT TGTGCAACGT ATCTGTGGTG TATGTACCTA TTCGCACTAT CGCTGCGGTA CCGAAGCGGT GGAAAATGCG TTAGGGATCC AAATTCCCTT AAACGCAAAA TATCTGCGCT CCCTCATGCT TACCTCGCTC TTTATGCATG ACCATATAGT GCACTTCTAT CATCTCCACG GCTTAGACTG GGTTGATGTG GTTTCGGCCT TAAGTGCCGA CCCTGCGAAA GCCGCCCAAA TCGCCCTCAA ATATACCGAT AAACCCATCG CTGCTGGGGA AGGTGAATTA AGAGCAGTAC AAGAGCGTGT AAAAGGCTTT GTCGAAACCG GAAAACTTGG CCCCTTCGCC AATGCTTACT GGGGTAATGG CACCTATAAG TTTACCCCTG AACAAAACCT GATAGCCCTA TCGCACTACC TTAAAGCCCT TGAAGTACAA AGGGTTGCAG CAGAAATGCT CGCTATTTTC GGCGGTAAAT CCCCCCATCC ACAATCCTTA GTGGTGGGCG GTGTGACCTC AGTGCGCGAT ATGTTAAGTC CTGCTCGTCT GCAAGAATGG AAACAAAAAC ACGAGATCGT AACCGACTTT ATCCTGCGTG CTTATCAGGC TGATATCGTG ATGGCTGCGG AAGCCTTTGG CACTGAGCCT AGCGTACTAG GCGGCGTGAA TGTTAAAAAC TTCATGGCAA CCAACGATTT TGTGCTTGCC AATGGCGAAT ATTTGTTCGA CCAAGGCGTG ATTATGAATG GCGATTTAGC GGGTGTGAGT GATATTAACC CTGATCTCAT CGCCGAGGAC GTCAGCCACG CTTGGTACAA TGCTGATGCA CCACAACATC CCTACGATGG CACCACCATT CCAAACTATA CCGGTTTTGT TGAGCGGGAT ACGGTTTACG GCAAACTACC GACCTTAGAT GGTGATGGTA AATACTCTTG GGTGAAATCA CCTCGTTATC AAGGTGAACC CGTAGAAGTT GGCCCGCTGT CTTGCTTGTT GGTCAGCTAT GCCCGTGGTA ATAAAGTGGT TGTCGATGCT GTCAATGCCC TGCTTGCGCG CACAGGTCTT CCCGTGGAGG CACTCTTCAC CACCTTAGGC CGCACCGCTG CGCGGATGCT ACAAACCGTT ATCGTGGCAC AGGAAGGCCT TAAAACCTTC GATGCCTTGT TAACGAACAT TCAGTCTGAT GAAACCACCT ATGTGAAACC CCATATCGAT CCAAGTAAAG AGTATGTGGG TCACGCCATG ATGGAAGCGC CTCGCGGCAT GCTAAGCCAC TGGATCCGAA TCAAAAATGG TGTCATTGAG AACTATCAAG CCGTAGTACC GACTACCTGG AACGCAGGTC CTGTGGATGC CAACGGCAAG ATCGGTCCCT ATGAAGCCTC ACTGATTGGT TTGAAACTAG AAGATCCCAC TAAACCCCTT GAGGTGATAC GTATCATTCA CTCATTCGAC CCTTGCATGG CGTGTTCAGT ACACGTGATG GATTTCAAAG GTCAAGCATT GAGCGAGTTC CGTGTCAGCC CCAATGGTCA ATAA
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Protein sequence | MSKRVVIDPI TRIEGHLRIE VEVDENNVIN KAWSSSTLWR GIEVILKGRT PMDVGLIVQR ICGVCTYSHY RCGTEAVENA LGIQIPLNAK YLRSLMLTSL FMHDHIVHFY HLHGLDWVDV VSALSADPAK AAQIALKYTD KPIAAGEGEL RAVQERVKGF VETGKLGPFA NAYWGNGTYK FTPEQNLIAL SHYLKALEVQ RVAAEMLAIF GGKSPHPQSL VVGGVTSVRD MLSPARLQEW KQKHEIVTDF ILRAYQADIV MAAEAFGTEP SVLGGVNVKN FMATNDFVLA NGEYLFDQGV IMNGDLAGVS DINPDLIAED VSHAWYNADA PQHPYDGTTI PNYTGFVERD TVYGKLPTLD GDGKYSWVKS PRYQGEPVEV GPLSCLLVSY ARGNKVVVDA VNALLARTGL PVEALFTTLG RTAARMLQTV IVAQEGLKTF DALLTNIQSD ETTYVKPHID PSKEYVGHAM MEAPRGMLSH WIRIKNGVIE NYQAVVPTTW NAGPVDANGK IGPYEASLIG LKLEDPTKPL EVIRIIHSFD PCMACSVHVM DFKGQALSEF RVSPNGQ
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