| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2097 |
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| Symbol | hydC |
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| ID | 1169841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2194466 |
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| End bp | 2195140 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637343963 |
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| Product | quinone-reactive Ni/Fe hydrogenase, cytochrome b subunit |
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| Protein accession | NP_717700 |
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| Protein GI | 24373657 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1969] Ni,Fe-hydrogenase I cytochrome b subunit |
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| TIGRFAM ID | [TIGR02125] Ni/Fe-hydrogenase, b-type cytochrome subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACCATT CTGAAACCCG CATTCGGACA CTGGTTTTTA GTCCCGCAAT ACGGATTTTC
CACTGGTTAC GAGCACTGAC GATTTTAGTG CTGGTGATCA CCGGATTCTA TATTGCTTGG
CCGTTTCTTG TGGCGCCCGA AAGCACGGAT GTATTAGTAC AAGGTTGGAT CCGTTTTGCC
CATTTGATCT GCGGTTTTAT CTTAACCGCA GTCACCTTGG CCCGCTTCTA CTTGTATTTT
TTCAGTCGTA GCAATATCGA ACGGCGCTCG TTTCGTGATG TGATGAGTAT TAAGAGCTGG
ATTACCCAAC TAAAATCTTA CATTTGGATG GGGCATTTAC ATAAAGCTGG CGTTTACGGG
CCACTGCAAT TTGTGACATA TGTAGCAATC TCCTTTGTTG CGCTTGTGAT ATGTATTACT
GGTCTCGTAC TGTATGCCAA TGTCTACCAT GAAGGTTTAG GTGGCATGCT TTGGAGCAGT
GCAGCTTGGA TCACGGCGCA AATGGGTGGA CTGGCTCAGG TGAGAATTTG GCACCACTAC
CTCACTTGGG CATTCGTTAT CTTTGTGGTT ATCCACGTCT ACATGGCGGT TTGGTCAGGG
ATACGCTTCA AACATAACTC AGTTGACTCA ATTGTCTCTG GTTACGACTA CCCGAAACCA
GACTCACACC ACTAG
|
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| Protein sequence | MNHSETRIRT LVFSPAIRIF HWLRALTILV LVITGFYIAW PFLVAPESTD VLVQGWIRFA
HLICGFILTA VTLARFYLYF FSRSNIERRS FRDVMSIKSW ITQLKSYIWM GHLHKAGVYG
PLQFVTYVAI SFVALVICIT GLVLYANVYH EGLGGMLWSS AAWITAQMGG LAQVRIWHHY
LTWAFVIFVV IHVYMAVWSG IRFKHNSVDS IVSGYDYPKP DSHH
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