Gene SO_2073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2073 
SymbolhisD 
ID1169818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp2169632 
End bp2170948 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content52% 
IMG OID637343940 
Producthistidinol dehydrogenase 
Protein accessionNP_717676 
Protein GI24373633 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0141] Histidinol dehydrogenase 
TIGRFAM ID[TIGR00069] histidinol dehydrogenase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATGT TAACTTGGGC AGCGTTATCA GCCGATGAAC AAAAAACCGC GCTTCAACGC 
TCACCTTTAA TCGGTGATAG CGGCTTAGAA CAAAGTGTTC GCGCCATTGT CGATGCCGTT
GCCAGCCGTG GCGATGCAGC GATTAAAGAG TTTAATCAAA AGTTTGATGG TGCAAGGCTT
GCAAATATCA GTAGTGCCAA TAGCGACAAC TTACGTTTAA GCGAGCACGA AATCGAAGCG
GCCAGCGCGC GGGTATCGCC CGAACTGAAA GCTGCGATTG CCCAAGCGAT GGCCAATATT
GATGTGTTTC ACAGCGCACA ACAATTTCGC CCCATCGACA TTGAAACCCA AGCGGGGGTT
CGCTGCGAGC TTCGTAGCGA ACCGATTGAA AAAGTGGGTT TATATATTCC TGGCGGTAGC
GCCCCATTAA TCTCAACCGT ACTGATGTTG GCCCTGCCAG CCACAATTGC TGGCTGCGAA
CAACGGGTAC TCGTGAGTCC ACCACCGATC AATGATGCGA TTGTTTATGC CGCAAATGTC
TGCGGCATTA CCGAGATCTA TCAAGTGGGT GGCGCGCAGG CGATTGCCGC ACTGGCCTTT
GGCACTGAAA CGATTCCTAG CGTCGATAAG ATTTTTGGCC CAGGCAATCG TTATGTCACC
GAGGCCAAGC GCTTAGTCTC GCAGGACGGT CGCTGTACTG TGTCTATCGA TATGCCAGCA
GGCCCTTCCG AGGTATTAGT GATTGCCGAT AGCGATGCCA ATGCGCAGTT TATTGCCGCG
GATTTACTCT CCCAAGCGGA GCACGGTCCT GATTCGCAGG TCATTTTAGT CACTGATTCT
TTGCCATTAG CACAGGCGGT TAATCAGGCA CTCAAATCGC AACTGGCCGC CCTGCCACGC
CAAGAGATTG CCGCTACCGC CTTAAAAGGC AGCCGCACCA TTCTGGTCAA AGATATGCAA
GAAGCCGCGC TCGTTTCAAA TCGCTATGGG CCTGAACACT TAATTATTCA AACCCGTTTT
CCGCGGGAAG TGCTAAATAA TATTCGCGCT GCAGGCTCAG TGTTTTTAGG CGCCTATACA
CCTGAATCGG TTGGGGATTA CGCCAGTGGC ACTAACCATG TATTGCCGAC TTATGGTTAC
AGCCGCGCAG TATCGAGTCT CTCACTGGCC GACTTCAGTC GCCGCTTTAC GGTGCAAGAA
CTCAGTGCCA AGGGCCTGCT AGGTCTTGGA CAAGCGGTGA TGACCCTTGC CAGCAATGAG
TTACTCGATG CCCATAAAAA TGCAGTTGCG GTGCGCTTAG CCAGTCTTAA AGGCTGA
 
Protein sequence
MDMLTWAALS ADEQKTALQR SPLIGDSGLE QSVRAIVDAV ASRGDAAIKE FNQKFDGARL 
ANISSANSDN LRLSEHEIEA ASARVSPELK AAIAQAMANI DVFHSAQQFR PIDIETQAGV
RCELRSEPIE KVGLYIPGGS APLISTVLML ALPATIAGCE QRVLVSPPPI NDAIVYAANV
CGITEIYQVG GAQAIAALAF GTETIPSVDK IFGPGNRYVT EAKRLVSQDG RCTVSIDMPA
GPSEVLVIAD SDANAQFIAA DLLSQAEHGP DSQVILVTDS LPLAQAVNQA LKSQLAALPR
QEIAATALKG SRTILVKDMQ EAALVSNRYG PEHLIIQTRF PREVLNNIRA AGSVFLGAYT
PESVGDYASG TNHVLPTYGY SRAVSSLSLA DFSRRFTVQE LSAKGLLGLG QAVMTLASNE
LLDAHKNAVA VRLASLKG