Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2073 |
Symbol | hisD |
ID | 1169818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 2169632 |
End bp | 2170948 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637343940 |
Product | histidinol dehydrogenase |
Protein accession | NP_717676 |
Protein GI | 24373633 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0141] Histidinol dehydrogenase |
TIGRFAM ID | [TIGR00069] histidinol dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATATGT TAACTTGGGC AGCGTTATCA GCCGATGAAC AAAAAACCGC GCTTCAACGC TCACCTTTAA TCGGTGATAG CGGCTTAGAA CAAAGTGTTC GCGCCATTGT CGATGCCGTT GCCAGCCGTG GCGATGCAGC GATTAAAGAG TTTAATCAAA AGTTTGATGG TGCAAGGCTT GCAAATATCA GTAGTGCCAA TAGCGACAAC TTACGTTTAA GCGAGCACGA AATCGAAGCG GCCAGCGCGC GGGTATCGCC CGAACTGAAA GCTGCGATTG CCCAAGCGAT GGCCAATATT GATGTGTTTC ACAGCGCACA ACAATTTCGC CCCATCGACA TTGAAACCCA AGCGGGGGTT CGCTGCGAGC TTCGTAGCGA ACCGATTGAA AAAGTGGGTT TATATATTCC TGGCGGTAGC GCCCCATTAA TCTCAACCGT ACTGATGTTG GCCCTGCCAG CCACAATTGC TGGCTGCGAA CAACGGGTAC TCGTGAGTCC ACCACCGATC AATGATGCGA TTGTTTATGC CGCAAATGTC TGCGGCATTA CCGAGATCTA TCAAGTGGGT GGCGCGCAGG CGATTGCCGC ACTGGCCTTT GGCACTGAAA CGATTCCTAG CGTCGATAAG ATTTTTGGCC CAGGCAATCG TTATGTCACC GAGGCCAAGC GCTTAGTCTC GCAGGACGGT CGCTGTACTG TGTCTATCGA TATGCCAGCA GGCCCTTCCG AGGTATTAGT GATTGCCGAT AGCGATGCCA ATGCGCAGTT TATTGCCGCG GATTTACTCT CCCAAGCGGA GCACGGTCCT GATTCGCAGG TCATTTTAGT CACTGATTCT TTGCCATTAG CACAGGCGGT TAATCAGGCA CTCAAATCGC AACTGGCCGC CCTGCCACGC CAAGAGATTG CCGCTACCGC CTTAAAAGGC AGCCGCACCA TTCTGGTCAA AGATATGCAA GAAGCCGCGC TCGTTTCAAA TCGCTATGGG CCTGAACACT TAATTATTCA AACCCGTTTT CCGCGGGAAG TGCTAAATAA TATTCGCGCT GCAGGCTCAG TGTTTTTAGG CGCCTATACA CCTGAATCGG TTGGGGATTA CGCCAGTGGC ACTAACCATG TATTGCCGAC TTATGGTTAC AGCCGCGCAG TATCGAGTCT CTCACTGGCC GACTTCAGTC GCCGCTTTAC GGTGCAAGAA CTCAGTGCCA AGGGCCTGCT AGGTCTTGGA CAAGCGGTGA TGACCCTTGC CAGCAATGAG TTACTCGATG CCCATAAAAA TGCAGTTGCG GTGCGCTTAG CCAGTCTTAA AGGCTGA
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Protein sequence | MDMLTWAALS ADEQKTALQR SPLIGDSGLE QSVRAIVDAV ASRGDAAIKE FNQKFDGARL ANISSANSDN LRLSEHEIEA ASARVSPELK AAIAQAMANI DVFHSAQQFR PIDIETQAGV RCELRSEPIE KVGLYIPGGS APLISTVLML ALPATIAGCE QRVLVSPPPI NDAIVYAANV CGITEIYQVG GAQAIAALAF GTETIPSVDK IFGPGNRYVT EAKRLVSQDG RCTVSIDMPA GPSEVLVIAD SDANAQFIAA DLLSQAEHGP DSQVILVTDS LPLAQAVNQA LKSQLAALPR QEIAATALKG SRTILVKDMQ EAALVSNRYG PEHLIIQTRF PREVLNNIRA AGSVFLGAYT PESVGDYASG TNHVLPTYGY SRAVSSLSLA DFSRRFTVQE LSAKGLLGLG QAVMTLASNE LLDAHKNAVA VRLASLKG
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