Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2041 |
Symbol | |
ID | 1169790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 2138423 |
End bp | 2140036 |
Gene Length | 1614 bp |
Protein Length | 537 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637343912 |
Product | hypothetical protein |
Protein accession | NP_717644 |
Protein GI | 24373601 |
COG category | [S] Function unknown |
COG ID | [COG1322] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCATTTT CACAATCTTT TTCCCTCGCT CAGATCATCG GCCTGATCGC CGTGGCCTTT TTAGGACTGT TAATCGGTGC CCTACTCAAT CAACGTCTTA CCCGTTCACG CTGGCAACAG TTTAAGGACG ATTTAGAGCA AGAAATGCGC CAAGTTAACG AAGATGCAGA GCTTTCCCTC GCGCAGCAAC AAATTTTAGT GGATGACAAA GATAGCCAAC TTCGCCTGTG CCAGCAGCGC TTAGAGCAAA AAATCGAACA TCTAGGCAAA GCTGAAGCCT TAGCCGAGCG CGTGCCGAGT TTAGAGCAGC AATTAAGCGA TAGTCATCGC CGTCAGCTCG AATTACAACT GGCCTTGTCT AAATCCAATG CCATGCAACA AACGATTCAA GCCAAAGCGG ATGCCCAGCA AGAATCACTG CGGGAAAAAA TCGCCACCTT AGAAAGTGCT GAAGTACGCC TGCAAACCCA ATTTGAAAAT CTTGCTAACC GTATTTTCGA AGAGCGCAGC GAAAACTTTA AACACCAAAA TGCTAATCAA TTAGAAGGCG TACTCGGGCC GTTAAAGCAG CAGTTAGAAG GTTTTAGGCA ACAAATCCGC GAATCCTACA ACCATGAGCA ATCGGAGCGA AGTGCCCTTA AGCATCAATT AGAGCACCTG CGCGATCTCA ACTTAAAAAT GAGCCAAGAT GCCATCAACC TAACAAAAGC CCTGAAAGGC GATAACAAGC AGCAAGGCAA CTGGGGAGAA GTCATTTTAG ATAGAGTGTT ACAGGAAAGT GGCCTGCGCG AAGGTCACGA ATACCACACC CAGCAAGACC TTAAAGATGA CAGCGGCAAA CGCTTTAAGC CCGATGTCAT CGTGCATTTG CCTGAAAATA AAGACGTGGT GATCGATGCT AAAATGTCGC TTATCAGCTA CGAGCGTTAT TTTAATAGTG AAGATCCGCT GGTGCGAGAG CAGGCCATCA ATGAACATGT GTTATCCATT CGCAACCATA TTAAAGGCTT GAGCCAAAAG GATTATCAGC GTTTACATGG GCTTAAAAGC TTAGATTATG TGTTGATGTT TATCCCCATA GAGCCAGCCT TTCTGCTGGC CTTGGAGCAT GATCCCAGTT TGGTCAACTT TGCCCTTGAG CAAAATATTA TGCTGGTCAG CCCAACCAAC CTCTTGGTTG CCCTGCGCAC CATCAATAAT ATTTGGCGCT ACGAATACCA AAATCAACAT GCGCAAACCA TTGCTAAACA AGCAGGTCGG ATCTATGACA AACTTTGTGG CTATCTCGAG GATATGGAAA AACTCGGCCG CGCATTGGAT AACGCCGAGA AAACCTATCA CAGTGCGATG AATAAATTGT CCTCGGGTAA AGGTAATTTA GTGCGTCAAG CGCATTTAAT GCAGCAACTG GGTGTTGATA CCAGCAAACA ACTCGATAAG ATGTTACTTG AGAAAGCGCT AAATGAAGCC TTAGACGACA GCGATGTTGC ACAGACAAAC GATATCGAGG ACGATTACAC GGCAAGTGCA AGCGAAAGTC TATCCATGGT CACAAAGACT GAGGATGCCG ACGCACTCGA ACAACACCAA ACCTATACGC AGCAAAACGC CTAA
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Protein sequence | MPFSQSFSLA QIIGLIAVAF LGLLIGALLN QRLTRSRWQQ FKDDLEQEMR QVNEDAELSL AQQQILVDDK DSQLRLCQQR LEQKIEHLGK AEALAERVPS LEQQLSDSHR RQLELQLALS KSNAMQQTIQ AKADAQQESL REKIATLESA EVRLQTQFEN LANRIFEERS ENFKHQNANQ LEGVLGPLKQ QLEGFRQQIR ESYNHEQSER SALKHQLEHL RDLNLKMSQD AINLTKALKG DNKQQGNWGE VILDRVLQES GLREGHEYHT QQDLKDDSGK RFKPDVIVHL PENKDVVIDA KMSLISYERY FNSEDPLVRE QAINEHVLSI RNHIKGLSQK DYQRLHGLKS LDYVLMFIPI EPAFLLALEH DPSLVNFALE QNIMLVSPTN LLVALRTINN IWRYEYQNQH AQTIAKQAGR IYDKLCGYLE DMEKLGRALD NAEKTYHSAM NKLSSGKGNL VRQAHLMQQL GVDTSKQLDK MLLEKALNEA LDDSDVAQTN DIEDDYTASA SESLSMVTKT EDADALEQHQ TYTQQNA
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