Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2015 |
Symbol | recR |
ID | 1169767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 2113551 |
End bp | 2114150 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637343890 |
Product | recombination protein RecR |
Protein accession | NP_717621 |
Protein GI | 24373578 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0353] Recombinational DNA repair protein (RecF pathway) |
TIGRFAM ID | [TIGR00615] recombination protein RecR |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATTTA GTCCGCTGCT AGACGAGTTA ATTCAGTCCC TGCGTTGTTT ACCAGGGGTT GGGCCGAAAT CGGCTCAACG TATGGCGTTT CAATTACTTG AGCGTGACAG AAAAGCGGGG CTTAAATTAG CCGCCGCGCT GTCGAGTGCC ATGAGTGATA TCGGTCATTG TCAGTCTTGC CGAACCTACA CTGAAGAAAC CCTATGTCCA ATTTGTGCTA GCCATAAGCG CGGTTCGTCT TCGACAATTT GTGTGGTCGA AACACCAGCC GATGTGTTAG CCATTGAAGC GGGTGGACAT TTCACGGGTC GCTACTTTGT GCTCCTTGGG CACTTATCAC CCCTTGATGG GGTGGGGCCA GAAGAGTTAG GCTTGGCGTT ATTAGAGCGT CACCTAGCCT CAGGCGATGT GGCCGAGTTG ATTTTAGCAA CTAATCCTAC GGTTGAAGGT GAGGCCACCG CCCACTTTAT TGCCGATATG GCAAGGCGCC ACAAGGTGCT GATCAGCCGC ATTGCCCACG GCGTGCCCGT CGGCGGTGAG CTAGAATATG TCGACAGTAC GACCTTGGCG TTGTCCTTTA ATGGTCGTAT CCCGCTGTAG
|
Protein sequence | MKFSPLLDEL IQSLRCLPGV GPKSAQRMAF QLLERDRKAG LKLAAALSSA MSDIGHCQSC RTYTEETLCP ICASHKRGSS STICVVETPA DVLAIEAGGH FTGRYFVLLG HLSPLDGVGP EELGLALLER HLASGDVAEL ILATNPTVEG EATAHFIADM ARRHKVLISR IAHGVPVGGE LEYVDSTTLA LSFNGRIPL
|
| |