Gene SO_2012 details

Gene Information

• Locus tag: SO_2012
• Symbol: apt
• ID: 1169764
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 2109294
• End bp: 2109839
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637343887
• Product: adenine phosphoribosyltransferase
• Protein accession: NP_717618
• Protein GI: 24373575
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0503] Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
• TIGRFAM ID: [TIGR01090] adenine phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATACAG AAACCTTATC CTTGATAAAG CAAAGCATTA AAACAATTCC TAATTATCCT 
AAGGAAGGGA TTCTATTTCG CGATGTGACT AGCTTGCTGG AAAACGCTAC CGCTTACAAA 
GCGACTATCG ATTTATTGGT TGAGCATTAT CGTAGTAAAG GCTTTACCAA AATTGTGGGC 
ACCGAAGCCC GTGGTTTTCT GTTTGGTGCG CCTTTAGCGC TGGGGTTAGG CATTGGTTTT 
GTGCCTGTAC GTAAGCCGGG TAAATTGCCG CGTGCTACTA TCAGCCAAAG CTATGAGCTG 
GAGTATGGTC ACGATAGCCT TGAAATCCAT ACTGATGCGA TTACCGCGAA CGATAAAGTA 
TTAGTGGTTG ATGATTTACT GGCGACTGGT GGTACTATCG AAGCGACGGT TAAACTTATC 
CGCCAATTGG GTGGTGAAGT GCAAGATGCC GCTTTTGTGA TTTCGTTACC TGATTTAGGC 
GGCGAGGCGC GTTTAACCGC CTTAGGTCTT GAGTTGGTTA AACTTTGTGA GTTTGAAGGC 
GAATAA 

 

Protein sequence

MNTETLSLIK QSIKTIPNYP KEGILFRDVT SLLENATAYK ATIDLLVEHY RSKGFTKIVG 
TEARGFLFGA PLALGLGIGF VPVRKPGKLP RATISQSYEL EYGHDSLEIH TDAITANDKV 
LVVDDLLATG GTIEATVKLI RQLGGEVQDA AFVISLPDLG GEARLTALGL ELVKLCEFEG 
E