| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1994 |
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| Symbol | |
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| ID | 1169749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 2093972 |
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| End bp | 2095273 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637343872 |
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| Product | membrane-bound lytic transglycolase-related protein |
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| Protein accession | NP_717601 |
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| Protein GI | 24373558 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGCAA AAGGAATGTA TTATCTTGCT GCGAGTATCA CAGCGTGTGT GAGCTTAAGT
GCTTGTTCTA GCTCGCCAAC GTCTAGCAGT ACGCCTAGCA ATAATAGTGA TACTGCTATC
GTACAGACGC AAGCCGCTGC GCAAGAAGTG CAATTGAACG AGATTATCAC CAGTCATGCA
GCAGCCTTTC CGACTTGCGT GACAAACCTC CAGAAGCGCG CTCGACGTGA AGGTTTATCC
GAAGAGACCA TTAACAACAC TGTGGCCAGT CTGCAGTTTG TGCCTAAGGT GATTGAGTTT
GACCAGTCCC AGCCTGAATT TAGCCAAACT TTCACCAATT ACTTCACCAA ACGGGCAACT
GATTGGCGAG TAAATGAAGG TCGACGTCTG CTGAAAAAGC ACCGAGTGTT GCTTGAACAA
CTCGCGCAGC AATATGGCGT GCCGCCCCAA TATATTCTGT CTTTTTGGGG GCTGGAGACC
AACTACGGTT CCTATAAAGG CAAAATGTCC GTTTTAGATT CCCTCGCGAC CTTGGCCTGC
GAGCCACGTC GAAGTGATTA TTTTACGACT GAGCTGATGC AAGCGCTCAA GTTAAAAGAA
AAATATGGCT TCGATAAGCG TACTATGGTG GGCTCTTGGG CGGGCGCCAT GGGGCATACT
CAGTTTATGC CCTCGGCCTA TGCTAAATAC GCCATCGATG GTGATGGGGA CGGTAAAGCG
GATCTGTGGA ATAGCACAGA AGATGCTCTC ACATCTGCGG CAAACTTTCT GCAACACTTA
GGTTGGCAGC GTAACGAACG CTGGGGCCGT GAAGTGTTAT TGCCAAGCAA TTTCGGCTAT
GAGCATCTTG GTGCAAAACA GGCTCTACCT TTGTCTCAAT GGGCGGCGCA ATCTGTGTTG
CAAACGAATG GATTGCCTTT ACCTGCTATC GATCTGAAAG CTGCACTGTA CTTGCCTTCT
GGTCATACGG GCCCTGCATT CTTAGGTTAT GAAAACTTCA ATGTGATTAT GCGTTGGAAC
CGCTCTGAAT TTTACGCCAT CACCGTAGGC CATTTGGCTG ACCGGATTAA TGGTGGTGAA
CCGCTCAAGG TGACACCACC CGAGCAGCCT CGATTAAGCC GTGAGCTAAT CAAACAGTTA
CAAACCAAAC TAAATGAATC CGGCTTTGAT GTCGGTAAAC CGGACGGCGT GCTTGGGCGC
AATTCTACGG CGGGGATCCA GGCATTCCAA CGTAGTAACA ATATGATTGC CGATGGTTTT
CCAAGCCCAG AAGTGTTTAC TGCCCTAGGT ATTTCACTCT GA
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| Protein sequence | MKAKGMYYLA ASITACVSLS ACSSSPTSSS TPSNNSDTAI VQTQAAAQEV QLNEIITSHA
AAFPTCVTNL QKRARREGLS EETINNTVAS LQFVPKVIEF DQSQPEFSQT FTNYFTKRAT
DWRVNEGRRL LKKHRVLLEQ LAQQYGVPPQ YILSFWGLET NYGSYKGKMS VLDSLATLAC
EPRRSDYFTT ELMQALKLKE KYGFDKRTMV GSWAGAMGHT QFMPSAYAKY AIDGDGDGKA
DLWNSTEDAL TSAANFLQHL GWQRNERWGR EVLLPSNFGY EHLGAKQALP LSQWAAQSVL
QTNGLPLPAI DLKAALYLPS GHTGPAFLGY ENFNVIMRWN RSEFYAITVG HLADRINGGE
PLKVTPPEQP RLSRELIKQL QTKLNESGFD VGKPDGVLGR NSTAGIQAFQ RSNNMIADGF
PSPEVFTALG ISL
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