Gene SO_1987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1987 
Symbol 
ID1169743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp2089890 
End bp2090441 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content42% 
IMG OID637343866 
ProductATP-dependent protease La 
Protein accessionNP_717594 
Protein GI24373551 
COG category[R] General function prediction only 
COG ID[COG2802] Uncharacterized protein, similar to the N-terminal domain of Lon protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAC CTCTTTTTCC CTTGCCCATC TGTTTATTGC CCGAGGGATA CACTCAATTA 
CGGATTTTTG AACCTCGATA TAAACGTTTG GTGGCTGAAT CACTTAAATC AGGCGATGGC 
TTTGGCCTGT GTATGACATC AGAAGAAGTT AACACGCTTT ATCCGATAGG AACTCTGGTG 
CATATCATTG ATTTTGAGAC CTTATCTGAC GGCATGTTAG GCGTAAGCAT TGAAGGGAAA 
CAACGATTTA TCCTCGGCGA TATCAGTGTG GAGTCCGATG GCCTAAAACG TGCGCAAATC 
AATTTAATCG ATAACTGGCC AGCAGCACCT ATTCATGAAA ATGAACATTA TCTCAGTGAC 
ATGTTGCAAA ATATCCTTAA AGAGTATCCA AAGCACCTAC AACAATATCA AGCGGCACAA 
TTTGATGATA TTGCATGGGT TTGCCAACGC TGGCTTGAGA TATTGCCCAT CCGTTCCGCA 
GAAAAATACA CCTGCATTAA TGCTCTGGAC CACCAGCTCA CACTGGATTT ATTAAGAACC 
GTCATAAAAT AA
 
Protein sequence
MKLPLFPLPI CLLPEGYTQL RIFEPRYKRL VAESLKSGDG FGLCMTSEEV NTLYPIGTLV 
HIIDFETLSD GMLGVSIEGK QRFILGDISV ESDGLKRAQI NLIDNWPAAP IHENEHYLSD 
MLQNILKEYP KHLQQYQAAQ FDDIAWVCQR WLEILPIRSA EKYTCINALD HQLTLDLLRT 
VIK