Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1946 |
Symbol | phoP |
ID | 1169706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 2049116 |
End bp | 2049790 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637343829 |
Product | transcriptional regulatory protein PhoP |
Protein accession | NP_717553 |
Protein GI | 24373510 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGAATTT TGGTTGTTGA AGATGATCTT ATTTTATCCC ACCATCTAAA AGTACAACTA AGTGACTTGG GCAACCAAGT TCAAGTTGCC CTCACTGCCA AGGAAGGATT CTTCCAAGCA ACCAATTATC CCATAGATGT CGCGATTGTC GATTTAGGTT TACCCGATCA AGATGGTATC AGCCTTATCC AGCAATTACG TGAAGAAGGC GTTAAAGCCC CCATTCTTAT CCTCACGGCG AGGGTGAATT GGCAAGATAA AGTTGAAGGC CTCAATGCGG GCGCAGACGA TTACTTAGTT AAACCCTTCC AAAAAGAAGA ACTTGTTGCA AGGCTTGATG CCTTGGTCAG ACGCAGCGCA GGGTTTGTCA AACCTGTTAT TACCAGTGGT GAGTTAAAAC TCGATCTTGC CGCTAAACAA GTGACCCTCG GTAATGACAT CATGGAAGTC ACCGCCTTTG AGTATCTTAT CCTCGAATAT TTAATGCGCC ATTGCCACGA GGTAGTAGCA AAGCAGCGGC TGCTAGATGT GATCTATGGC GACAAAGAAG GCGACCCAAA TACTATTGAA GTCATGGTGA GCCGTTTACG TAAAAAACTG ACCCGCGATG GAATAGATAA TCCGATAGCG ACAATCCGTG GCCAAGGATA TAAATTCAAT CTGCCATGCA ACTAA
|
Protein sequence | MRILVVEDDL ILSHHLKVQL SDLGNQVQVA LTAKEGFFQA TNYPIDVAIV DLGLPDQDGI SLIQQLREEG VKAPILILTA RVNWQDKVEG LNAGADDYLV KPFQKEELVA RLDALVRRSA GFVKPVITSG ELKLDLAAKQ VTLGNDIMEV TAFEYLILEY LMRHCHEVVA KQRLLDVIYG DKEGDPNTIE VMVSRLRKKL TRDGIDNPIA TIRGQGYKFN LPCN
|
| |