Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1938 |
Symbol | cobB |
ID | 1169699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 2042650 |
End bp | 2043381 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637343822 |
Product | NAD-dependent deacetylase |
Protein accession | NP_717545 |
Protein GI | 24373502 |
COG category | [K] Transcription |
COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACCAAC ATATTGTGGT ATTAACTGGC GCGGGTATTT CTGCTGAGTC GGGATTACGT ACCTTTCGCG ATCAAGATGG TTTGTGGGAA GAGCATCATA TAGAAGATGT GGCAACACCA GAAGGCTATG CAAAAGATGC TGAACTCGTC GAACGTTTCT ATAACAGTCG CTGGGAGCAA TTACACTGTG GTACTGTGAT GCCTAATGCG GCACATCTTG CATTAGCCAA GTTAGAGGCT GAGTTTTCTG GGCAGTTATT GGTTGTAACT CAAAATATTG ATGATTTACA TGAGCGTGCT GGATCTCGTC GTTTACTGCA TATGCACGGC GAACTCTCTA AAGGACGCTG TCCGCGCTCG CGCCAAACCT TTTTATTAAG AGAACCTTTT GGAGTGAATA ACGGCTGTAC TTGCTGTATT CCCGCGCAAA GACTGCGGCC CCATGTGGTG TGGTTTGGCG AAATGCCCTT AGGGATGGAT AGAATTCACG ATGCGCTCGA TAACTGTGAT TTATTTATCG CCATTGGTAC CTCGGGCACG GTTTATCCTG CTGCGGGTTT TGTCGACACG GCAAATCACC ATGGAGCGCA AACCGTTGAG GTCAACCTAC AATCGCCCGA TAGGCATAGC CAATTTCAAT ACCATTTAAC GGGAAGGGCT GGGGAACTCG TACCTAAATT AGTGGATACG ATTCTCGCGG GGCGTGTGAT CGGCTCTGAT TTGGCCGAAT GA
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Protein sequence | MYQHIVVLTG AGISAESGLR TFRDQDGLWE EHHIEDVATP EGYAKDAELV ERFYNSRWEQ LHCGTVMPNA AHLALAKLEA EFSGQLLVVT QNIDDLHERA GSRRLLHMHG ELSKGRCPRS RQTFLLREPF GVNNGCTCCI PAQRLRPHVV WFGEMPLGMD RIHDALDNCD LFIAIGTSGT VYPAAGFVDT ANHHGAQTVE VNLQSPDRHS QFQYHLTGRA GELVPKLVDT ILAGRVIGSD LAE
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