Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1915 |
Symbol | |
ID | 1169678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 2012448 |
End bp | 2016350 |
Gene Length | 3903 bp |
Protein Length | 1300 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637343801 |
Product | serine protease |
Protein accession | NP_717522 |
Protein GI | 24373479 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAA AAATTGCATT AGCAGTGTCA ATGGCACTGC TGTCATCTGC AGCAAATGCT CAAACCGTAT TATCTCACAG CGGTGAAACT GTACAGTTTG ATATTAGTCC TGAATTAGCG GCAAGTACTG TTCGCGGCAG TTTATCCATC GAAGCTAACG AGGTTAAATT TGTCCCGGAA GTGGATTTAG ATGATAGTGA ATACACTTAT ATTGTGCGTT TACGTGACAG TGCTGCAGCA AATTACCAAG GTGAAATTGC TGGCTTTAAA GCAACGAGCC CGCAACACAC TAGTAGCCGT ATTTCGAGTC AATTCTCTGG TAATGTAAAG CTGGATGCAG CTAAGCCTGA AGTTAAAAAC TATGTTAGTT ATCTTAAGGT TAAGCAAAAT CGATTTTTAA CGAATGCCAG TGCTGCGATA GGTAGTCCCA TCGAAGCATT AACCACCTAT CAGTATGCGC TTAATGGTAT GGCGATTCGC ATGACGCAGG CGCAGGCGAT CAAAATGGCT GAGCTGCCAG ACGTCGTCTT TATTGAGCGT GAGCGTATTG AACAGTTAGA AACCGATGTA AGTCAATCGC TTATTGGTTC ACCTAAAATA TGGGATGGCA GTGCCACTGG CACAAAGGCG ATGGGCGAAG GGGTGATAGT CGGGATTATT GATTCTGGCA TTAACTCTGA TCACGCTTCC TTTGCCGATA TTGGTGGCGA TGGTTATGAC CACAGTAATC CGCTAGGTCA AGGTATCTAT ATCGGTGATT GTAAAACTGA TTTTACCAGC ATGTGTAATG ACAAATTGAT TGGTGTTCGC AGCTATTCTG AGATCACTAA CAATTATGAT GATGCAAAAG TCTTTGGTGA TAAACCACCG GCTAAAAATG GTGAAGACTA CGGTGGACAT GGTTCCCATG TTGCGAGCAC CGCCGCTGGT AATATTCTGT TAAATGTCCC CTATGTACAA GGTGAAGCCG GAAAGCTCGA AGCTGAGGGG ATTCCAACCG ATATTAAATT TGCGCAAATA TCCGGTGTGG CACCCCATGC CAATATTATT GCCTATCAAA TTTGTAATCC TGGTAATGCA GGAGACACCT ATTCTGGTTG CCCAACTGCA CCGATATTAA AAGCGATTGA TGATTCGATT AAAGATGGCG TCGATGTGCT GAACTTTTCT ATCAGTGGTG GCGGTAATCC ATGGAATAGT GCTACAGAGC AAGGTTTTTT AGCTGCACGT AATGCGGGGA TTTTCACGGC AGTTGCTGCT GGCAACACTC GCCCTGCTAC TGCAACCAGT GCAGCTATTA CCCAAACACC ATACTCAACA CCGAAAAATG CTCCTTGGTA TACCTCGGTG GCAAACTCCA CTCACGATCG AGATATTGTG AGCGCAGTTG AGTTTAATGG TAAAAATTAT AGTTTTACGG CTGGGTCTGG CCCTGCTTTG ACGGAAGTCT TAAGTGGGAT CCCTGTTTAT GCGGGCAGTC TCGATTCGAC GAATTTTGAA GCTTGTAAAG CCTTTGCAAC GGATGCCTTC AAAGGCAAAA TTGCAGTGAT AAAGCGCGGT GGTTGTACAT TTGATGTTAA AGTTGCAGCA GCATTGAACG CCGGCGCTAA AGGTGTTGTT GTGTTTAACC GAGAAGGTGA AGGCAACACA CGTTTAAGTA TGTCAGGTTT AGAGAAATTC AATATTCCAG CGGTATTTAT CGGTAACACC GATGGTCTTG CACTCATTGA TGCGATTACG GCCAATCCGA GTCTTGAATT GGTGATTTCA CCTTTGCCTA AAGTGGTAAC GAAGGAAGCT GATGTATTAA ACGCTAGCTC ACTTATCGGT CCCAATGCTA CAAATGATGT ATTAGTGCCC TTCGTTGCGG CACCTGGTAC AGATATTTAT GCAGCCTATG CTGATCAACA ATTTGGTCAT GACAAAACCG GCACTGATCC AGCTGATTTT ACCTTAATGT CGGGCACCTC CATGGCCAGT CCCCATGTGG CAGGCGCTGG AGCGTTATTA AAATCACTTC ACAAGGATTG GACACCGGAT CAAATCCGCT CAGCATTAAT GTTAACCGCT ACCACAGCTC AGGCGATGAA AAAAGCCGAT GCTAAGACTA TTGCCGATCC TTTCGATGTG GGAGCTGGCC GTATTCGCGT TGATTTAGCA GCCAAAACAG GCTTGGTGAT GGATGAATTG GGACTAAGTT ACGACATTGC CAATCCTGCG AAGGGCGGTG ATCCTCGTAA GTTAAACATC CCAAGTATGG CGGATTCACG CTGTATCGAT AATTGTACTT GGACTCGCAC AGTCACAGCT ACCGCTGACG GCACGTGGAC AGCTAAAGGG GTTGCTGTGA CCGATAAACT GGTGGTAACT GCATCGCCAG AGCGCTTTAG TCTGAAAAAA GGGCAAAGCC AAGTCATTAC CGTGACTGCC AATGTGGCTG AGGTTGGCGA AAATTGGGGC TTTGGTAATT TAGTGCTTGA ATCTGATGCC TTCCCAACGG CATCGATGCC AATCGCAGCC AAAATTGCCA AGCGTGATTT ACCTACAGCA TTGAATATCC TTGCCGCTCG CGATGCTGAT GAACGCAATT TTAACCACCT AAAGGCTATT GATATGCCTG GTGTTTCGGC AAAAGTGACC GCATTGGCGT TAAGCGATAC TCTTGAGTCC CGTGTGAAGC AGGATTCTGA TAACAACAGT GCATTTGACA ATTTGGAAGA TGGTGTCAAG GTCTTTACCT TTAATGTTGA AGATAACGCC TTGTTTTTCA ATGTATCAAT CGGTGAGACT ACATCTCCTG ACTTAGATAT GTTTGTGTTT CTAGACAAGA AAGATGGCAG TAAGTTGTCA CGGGTTGGCT CTTCTGCTTT AAATGGGTCT AAGGAACGTG TCTCCATTAA AAATCCGGTT AAGGGACAAT ATATTGTTAT CGTGCAAAAC TATGAGGCTT CAGCAGCCAA TGCTGAGGAT ACTTTTAGCC TCAAACAGGT GACACTGTAC AATGGGGCGG GCGATAACTT GACGGCGGCC CTTTCGGGTG ACAGTAAGGA TTTCAGTATC AACCTAGCTT GGAAGCAAGC TATGTTAGTC GGCAGCGATG GTTTGGCTCA ATTAACATTA ACCAGCAGCG ACGAGAAAGT GGCACCGGTT GCGATTCCGT TGTTGTTTGA GCGCACCATC GATGACGTGC TGCCACCTTT GGGAAGTACG ATATCCAGTG AATTAACACC TGGTGTACCT AAGGTGATAA AGACTCGGAT TGCTGCCAAT AGCACACCTG AGATGCGGGT TTACACCCTT GAAGCACAGA TCCCTGAAGG CCATGAAGTG GCCAATATAA GCCATAAAGG TGCACATCAG GCGAATAAGA TTAGCTGGAC AATTGATATG GCTTCTGCGG CCGCCGCTCA AGATATTACT TTTGAGCTTG TGCCACGTAA GGCAAGTCAA GAAAACCAAT TGATCTTAAC TAACAAAGTG AATAACGGTA GCGCTGAAAT CTTAAAGCAG GAATACCAAT TTGATGTGAC TGAAGTGGCG CCAGTTGCCA TGATTGAAGC GCCAGCGTCA GTTCAAGAAG GTAAGCCTTT GTTTATTGAT GCCAGTAAAT CCGCTGATGC CAATAATGAC CCATTAACTT ACAAATGGAC TCAGTTAGGC GGCGCGAGCT TTAATTTTGA CCCCACCGCG GCCAAATTAA ACTTAGTTGC ACCTAATGTG GATGGCGCTG CGCAAACGGT GTCTTTCCAA CTGACGGTAT CGGATAATCA TGGTAATCGC GATTCGAGTG TCGTGTCTGT CTCTATTACC GATACGCCAC CGAAGAAAGA TGACGGTGGT GCCTTAGGTT GGTTAAGTTT ACTTCTGCTG CCATTTGCCT TTGGTCGCCG TAAGCTGCGC TAA
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Protein sequence | MKTKIALAVS MALLSSAANA QTVLSHSGET VQFDISPELA ASTVRGSLSI EANEVKFVPE VDLDDSEYTY IVRLRDSAAA NYQGEIAGFK ATSPQHTSSR ISSQFSGNVK LDAAKPEVKN YVSYLKVKQN RFLTNASAAI GSPIEALTTY QYALNGMAIR MTQAQAIKMA ELPDVVFIER ERIEQLETDV SQSLIGSPKI WDGSATGTKA MGEGVIVGII DSGINSDHAS FADIGGDGYD HSNPLGQGIY IGDCKTDFTS MCNDKLIGVR SYSEITNNYD DAKVFGDKPP AKNGEDYGGH GSHVASTAAG NILLNVPYVQ GEAGKLEAEG IPTDIKFAQI SGVAPHANII AYQICNPGNA GDTYSGCPTA PILKAIDDSI KDGVDVLNFS ISGGGNPWNS ATEQGFLAAR NAGIFTAVAA GNTRPATATS AAITQTPYST PKNAPWYTSV ANSTHDRDIV SAVEFNGKNY SFTAGSGPAL TEVLSGIPVY AGSLDSTNFE ACKAFATDAF KGKIAVIKRG GCTFDVKVAA ALNAGAKGVV VFNREGEGNT RLSMSGLEKF NIPAVFIGNT DGLALIDAIT ANPSLELVIS PLPKVVTKEA DVLNASSLIG PNATNDVLVP FVAAPGTDIY AAYADQQFGH DKTGTDPADF TLMSGTSMAS PHVAGAGALL KSLHKDWTPD QIRSALMLTA TTAQAMKKAD AKTIADPFDV GAGRIRVDLA AKTGLVMDEL GLSYDIANPA KGGDPRKLNI PSMADSRCID NCTWTRTVTA TADGTWTAKG VAVTDKLVVT ASPERFSLKK GQSQVITVTA NVAEVGENWG FGNLVLESDA FPTASMPIAA KIAKRDLPTA LNILAARDAD ERNFNHLKAI DMPGVSAKVT ALALSDTLES RVKQDSDNNS AFDNLEDGVK VFTFNVEDNA LFFNVSIGET TSPDLDMFVF LDKKDGSKLS RVGSSALNGS KERVSIKNPV KGQYIVIVQN YEASAANAED TFSLKQVTLY NGAGDNLTAA LSGDSKDFSI NLAWKQAMLV GSDGLAQLTL TSSDEKVAPV AIPLLFERTI DDVLPPLGST ISSELTPGVP KVIKTRIAAN STPEMRVYTL EAQIPEGHEV ANISHKGAHQ ANKISWTIDM ASAAAAQDIT FELVPRKASQ ENQLILTNKV NNGSAEILKQ EYQFDVTEVA PVAMIEAPAS VQEGKPLFID ASKSADANND PLTYKWTQLG GASFNFDPTA AKLNLVAPNV DGAAQTVSFQ LTVSDNHGNR DSSVVSVSIT DTPPKKDDGG ALGWLSLLLL PFAFGRRKLR
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