Gene SO_1910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1910 
Symbol 
ID1169674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp2008349 
End bp2009224 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content49% 
IMG OID637343797 
Product1,4-dihydroxy-2-naphthoate octaprenyltransferase, putative 
Protein accessionNP_717517 
Protein GI24373474 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1575] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 
TIGRFAM ID[TIGR00751] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCCTT GGATTTTAGC CATTAGGCCC CGCACCTTAC CCGCGGCAAT CGGTCCCCTA 
TTAATTGGTA ATATTCTGGC GTTGCACCTT GAGCGTTTTA GTTGGTTAAT TGCCGCGACA
TCGATGCTAT GCGCCATTTT ATTGCAAATC GCGGTCAACC TTGCGAACGA CTACTTTGAT
TTTAAGAATG GTATCGATAC CGCCGAACGT ATCGGTCCGG TTCGTGTGAC ACAAAGTGGC
ATGATCCCAC CAAACACGGT ACGTAATGCC ATGGTATTGT GCCTATTACT GGCTTTAGCG
GTGGGATCTT ACTTGATTTG GCATGGTGGA TGGCCTATCG CGATTTTAGC TGCAGCAGCC
ATTTTAGGTG CCCTAGGTTA CAGTGGCGGC CCCTATCCTT TAGCGTCACA CGGACTGGGT
GAAGTCGCCG CCTTTGTGTT TTTTGGACTG GTTGCCGTCG TGGGAAGCTA TTATCTGCAA
GCAGGCGATA CCACCATTAA TGCTTGGCTG CTGGGATGTG CCATTGGCCT CTTTAATGCC
GCGATAATGT TAGTCAATAA TACCCGAGAT ATTCGTACCG ACACCCAGGC AGGCAAGCAC
ACTCTAGCTG TCAGGATAGG TGAGGCGCAG GCCAAAGTAC TGTATCAGGC CTTGATTTAT
TTACCCTTCG GTTTAGTGAT CGCCGGATTT TTATTGGGCA TTTTGCCAGG GCTCCCCGTG
TTACTTGCGG GTTTATCATT GCTTATCGCC CGTAAGCTCA GTAGTGATTT CTATGCCGTA
TCGGGTGAAG CGCTCAATCC ACTATTGGGA CGCACCGCAA AACTCACGAT GATCTTCAGT
ACCTTATTTA GCGTAGGACT GGTCTTTACC GCTTAG
 
Protein sequence
MNPWILAIRP RTLPAAIGPL LIGNILALHL ERFSWLIAAT SMLCAILLQI AVNLANDYFD 
FKNGIDTAER IGPVRVTQSG MIPPNTVRNA MVLCLLLALA VGSYLIWHGG WPIAILAAAA
ILGALGYSGG PYPLASHGLG EVAAFVFFGL VAVVGSYYLQ AGDTTINAWL LGCAIGLFNA
AIMLVNNTRD IRTDTQAGKH TLAVRIGEAQ AKVLYQALIY LPFGLVIAGF LLGILPGLPV
LLAGLSLLIA RKLSSDFYAV SGEALNPLLG RTAKLTMIFS TLFSVGLVFT A