Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1861 |
Symbol | uvrC |
ID | 1169629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 1952556 |
End bp | 1954385 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637343749 |
Product | excinuclease ABC subunit C |
Protein accession | NP_717469 |
Protein GI | 24373426 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTACAG GTTTTAACGC CCAGAGTTTT TTACGTACAG TCACCTCTTC GGCGGGGGTT TATCGCATGT ATGACGTCAA AGGTGACGTC ATTTATGTGG GTAAAGCCAA AGATCTTAAA AAGCGCTTAT CTTCTTATTT CCGTAAAAAC CTTGGCAATG TCAAAACCCA GGCGCTGGTG TCGCATATTC ATCATATCGA TGTGACACTG ACTCATAGTG AGACCGATGC GCTGCTGCTT GAAAATGACT ATATCAAGCA GTACATGCCT AAATACAATG TGTTACTGCG GGATGATAAG TCATACCCCT ATATTTTATT GAGTCAGCAT GAGCATCCAC GCCTTGCTTA CCATCGCGGG CCACAGCGGG AGAAGGGCCA TTACTTTGGA CCTTATCCTA ATGGCGGCGC GGTGCGTGAA AGTTTGCATT TGATGCAAAA GTTGTTTCCT ATCCGCCAGT GTGATGATCT CTATTACAAA TCCCGCACTC GCCCCTGTTT GCAATACCAG TTATCCCGCT GCAGTGCGCC TTGCGTTGGT AAAGTCAGTA ATGCGGAGTA TGACGAGCAG GTAAAACTTG CCAGTTTGTT CCTAAAGGGA AAAGATAAAC AAGTTATCAG TGAACTGGTG GCGAAGATGG AAGAGGCCGC CGAGCAGCAA GCCTATGAGC AAGCCGCGCG CTTTCGCGAT CAAATTATGG CGCTGCGCCG AGTGGCAGAG CAGCAAGAGG TATCTGGTAA TACTGGCGAT ATGGATGTTA TTGGTGTGCA TTACGCTTCG GGCATCGCCT GTTTTCACCT GTTATTTATC CGCGAAGGTA AGATTTTTGG TAGCCGTAGC TATTATCCAA CGGTTCCCGC GCAAACGGAT ATCGAAGAAG TCTTACGCTC CTTCCTGCTA CAGTTTTACT TAAATGCAGA TATTCAACGC ACTATTCCTA AGGAAGTGGT GATAAGCCAT CACTTTGAGG AATTGCATGA GTTAGAGGCG GCCGTCTCTG AGGCATTAAA TAAAAAATTC AGCATTAAAA CCAATGTGCG TGCTGACAGG GCGAGTTTTT TACGCCTCGC GATCACCAAC GCCACCAATG CGGTGATGAC GCGTCTGTCC CATAAAAACA CCGTTGAACA GCGTTTTGTG TTGTTGGAGG AGATTCTCGA ACTCAATGCG CCGATTCAGC GAATGGAGTG TTTCGATATC AGTCATACCA TGGGGGAGAG CACGGTAGCC TCCTGCGTGG TGTTTAACCG TGAAGGGCCG CATAAAGCCG AATATCGTCG TTACAATATT GAAGGCATCA CCCCTGGGGA CGATTATGCC GCCATGAAAC AAGCTATTAG CCGTCGATTT GATAAAATCG ATGCCAGCGG CAAAATCCCT GACATCTTAT TTATCGACGG TGGCCTCGGT CAGCTGCGTA TCGCACAGCA AATTGTCGAT GAAAAATTTG TCAATTTAGA TAAAGCGCCG CAACTGATTG GCGTGGCAAA GGGGGAGAGC CGTAAACCTG GGCTAGAAAC CTTAATCTTT GGTGACACAG AAACGAGTTT TTCCCTTGAG GATGATTCAC CCGCATTGCA CCTTATTCAA CATATTCGCG ATGAATCGCA CCGCTTTGCC ATCACTGGGC ATCGTAATCG CCGTCAGAAA ACCCGCAACA CCTCAACGCT TGAATCCATT CCAGGTATTG GCCCTAAACG CCGTAAAGCG TTACTCCAAC ATTTGGGCGG TTTACAGGAA GTGAAGGGCG CGAGTGTGGC CGAGTTAGCG AAAGTGCCGG GTATTAGCAT AGAAATGGCA CAAACCATTC ATGATGCATT GCGAGGGTGA
|
Protein sequence | MSTGFNAQSF LRTVTSSAGV YRMYDVKGDV IYVGKAKDLK KRLSSYFRKN LGNVKTQALV SHIHHIDVTL THSETDALLL ENDYIKQYMP KYNVLLRDDK SYPYILLSQH EHPRLAYHRG PQREKGHYFG PYPNGGAVRE SLHLMQKLFP IRQCDDLYYK SRTRPCLQYQ LSRCSAPCVG KVSNAEYDEQ VKLASLFLKG KDKQVISELV AKMEEAAEQQ AYEQAARFRD QIMALRRVAE QQEVSGNTGD MDVIGVHYAS GIACFHLLFI REGKIFGSRS YYPTVPAQTD IEEVLRSFLL QFYLNADIQR TIPKEVVISH HFEELHELEA AVSEALNKKF SIKTNVRADR ASFLRLAITN ATNAVMTRLS HKNTVEQRFV LLEEILELNA PIQRMECFDI SHTMGESTVA SCVVFNREGP HKAEYRRYNI EGITPGDDYA AMKQAISRRF DKIDASGKIP DILFIDGGLG QLRIAQQIVD EKFVNLDKAP QLIGVAKGES RKPGLETLIF GDTETSFSLE DDSPALHLIQ HIRDESHRFA ITGHRNRRQK TRNTSTLESI PGIGPKRRKA LLQHLGGLQE VKGASVAELA KVPGISIEMA QTIHDALRG
|
| |