Gene SO_1860 details

Gene Information

• Locus tag: SO_1860
• ID: 1169628
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 1951805
• End bp: 1952449
• Gene Length: 645 bp
• Protein Length: 214 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637343748
• Product: response regulator
• Protein accession: NP_717468
• Protein GI: 24373425
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGATATCGA TATATTTAGT TGACGATCAT GAGCTGGTAA GAACTGGGAT CCGCCGTATC 
TTAGAAGATG AGCGGGGGAT CAAAGTTGTC GGTGAAGCGC CCGATGGCGA GACCGCAGTA 
CAATGGGCTA GGCAAAATGA AGCCGACGTC ATCTTAATGG ACATGAATAT GCCAGTTATG 
GGCGGACTCG AAGCCACCCG TAAAATTTTG CGTTATCAAC CCCATGCCAA GATTATTGTA 
TTAACCGTGC ATACCGAAGA TCCTTTCCCC AGCAAAGTGA TGCAGGCGGG CGCGTCTGGT 
TATTTAACCA AAGGTGCGAC GCCACCCGAG GTGTTGCAAG CGATACGTCA GGTTTCCCGT 
GGTCAGCGCT ATTTATCCCC TGAAATAGCC CAACAAATGG CATTGAGCCA ATTTAATCCT 
GCCGATGAGA ATCCGTTTAA AGCCTTATCT GAGCGCGAAC TGCAAATTAT GTTGATGATC 
ACCAACGGTG AAAAGGTCAA TGATATTTCG GAGCAGCTCA ACTTAAGCCC AAAAACCGTT 
AACAGTTACC GTTACCGCTT ATTTGCGAAG CTGGGGATCA GTGGTGATGT GGAGCTGACC 
CGTTTAGCGA TCCGCTATAA AATGTTAGAT GCTGGACATT TTTAA 

 

Protein sequence

MISIYLVDDH ELVRTGIRRI LEDERGIKVV GEAPDGETAV QWARQNEADV ILMDMNMPVM 
GGLEATRKIL RYQPHAKIIV LTVHTEDPFP SKVMQAGASG YLTKGATPPE VLQAIRQVSR 
GQRYLSPEIA QQMALSQFNP ADENPFKALS ERELQIMLMI TNGEKVNDIS EQLNLSPKTV 
NSYRYRLFAK LGISGDVELT RLAIRYKMLD AGHF