Gene SO_1856 details

Gene Information

• Locus tag: SO_1856
• Symbol: fabA
• ID: 1169625
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 1947497
• End bp: 1948012
• Gene Length: 516 bp
• Protein Length: 171 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637343743
• Product: 3-hydroxydecanoyl-(acyl carrier protein) dehydratase
• Protein accession: NP_717464
• Protein GI: 24373421
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
• TIGRFAM ID: [TIGR01749] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAAAG CAAACAGTTT CAATAAAGAA GAACTTATCG CCTGTGGCCA TGGGAAATTA 
TTTGGTCCAA ATTCCCCTCG CCTCCCCGTA GACAACATGC TGATGATCGA CAGGATCATT 
ACCATTAATG ACAACGGTGG TGAGTTTGGA AAAGGTGAAA TTGTTGCCGA GCTCGATATT 
AAACCAGAAT TATGGTTTTT TGATTGCCAC TTTATCACTG ACCCTGTTAT GCCAGGCTGC 
TTAGGCTTAG ATGCTATGTG GCAACTCGTT GGGTTTTACC TAGGCTGGGA AGGCGCAGAA 
GGCAAAGGCC GCGCTTTAGG TGTGGGTGAA GTTAAGTTTA CTGGTCAAGT ATTACCCGGC 
GCTAAAAAAG TCACTTATAA GCTCAATATC AAACGCACCA TTCACCGTAA ATTGGTAATG 
GGTATTGCCG ATGCAATCCT TGAAGTCGAT GGTCGCCAAA TTTACAGTGC AACCGATCTT 
AAAGTCGGTG TCTTTAGCGA TACATCGACC TTCTAA 

 

Protein sequence

MNKANSFNKE ELIACGHGKL FGPNSPRLPV DNMLMIDRII TINDNGGEFG KGEIVAELDI 
KPELWFFDCH FITDPVMPGC LGLDAMWQLV GFYLGWEGAE GKGRALGVGE VKFTGQVLPG 
AKKVTYKLNI KRTIHRKLVM GIADAILEVD GRQIYSATDL KVGVFSDTST F