Gene SO_1793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1793 
Symboltig 
ID1169566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1880607 
End bp1881911 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content45% 
IMG OID637343681 
Producttrigger factor 
Protein accessionNP_717402 
Protein GI24373359 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) 
TIGRFAM ID[TIGR00115] trigger factor 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGTTT CTGTTGAAGC AACCCAAGGC CTAGAGCGTC GCCTGACCAT TTCTGTTCCT 
GCTGAACAAA TTGAAAAACT GGTTAAAGAC AGTTTACAAC GTGAAGCTAA GCGTGCTCGT
ATTCCGGGTT TCCGTCCTGG CAAAGTGCCT GTTACTGTCA TCAACAAACG TTATGGCGCA
GCTATTCGTC AAGACATCAC TGGTGAAGTG ATGCAACGTA ACTTTATCGA AGCGATCATC
GCAGAGAAAT TAAACCCAGC CGGTGCACCG ACTTTTGTAC CTGGTGCGAC TGACGGCGAA
AAATTTGAAT TCGTTGCAAC TTTCGAAATC TACCCAGAAG TTGAGTTGAA AGGTTTAGAT
GCAATCGTAG TTGAACAGCC AAAAGCGTCA GTGACGGATG CTGATGTGGA CAGCATGATT
GAAACGCTGC GCAAGCAACA TGCCACTTTT GCAGCGGTTG AGCGTGAAGC GGTTGATGGC
GACAAAGTGA AAATGAACTT TGTGGGCTCA GTTGACGGTG TTGAATTCGA AGGCGGTAAA
GCTGAAGATT TCGAACTGCA ATTAGGCAGC GGTCGTATGA TCCCTGGTTT TGAAGCGGGT
ATCTTAGGTC ACAAAGCGGG TGAAGAATTC GTTATCGACG TGACTTTCCC TGAGGAATAC
CACGCTGAAA ACTTAAAAGG TAAAGCTGCT AAGTTTGCTA TCACCTTAAC TGAAGTGTTA
GCGGCTAACT TACCAGAAGT AAACGATGAG TTTGCTGCAT TATTCGGTAT CACTGAAGGT
GGCTTAGAAG CACTGAAAAC CGAAATTCGT AAGAACATGA ACCGTGAACT TGAGCAAGCG
TTAAAAGCTA ACGTGAAAGA GCAAGTGATC GCAGGTTTAT TAGCTAACAA CGACATCGAA
CTGCCAAAAG CACTAATTGA TGGTGAAGTT AACGTATTGC GTCAACAAGC GATGCAACGT
TTCGGCGGTC AAACTGCTAA CATGCCTGAA CTGCCAGCTG AATTATTCAC TGAGCAAGCA
GCTCGTCGCG TGAAAATCGG TCTGTTATTA GGCGAAGTTA TCAAGACTAA TGAGCTGAAA
GCAGAAGATG AGCGTGTACA AGGTTTAATT GCCTCTATGG CTTCTGCTTA CGAAGATCCA
AGTGAAGTGA TTGCTTATTA CAACAGCAAC AAAGAACTGA TGCAAAACAT GCGCAACGTT
GCGCTTGAAG AGCAAGCTGT TGAAGCACTG CTTAAAACCG CAAAAGTGAC CGAAAAAACA
GTCGCTTTTG AAGAATTTAT GAACAAGGCT ACAGGTCGCG CATAA
 
Protein sequence
MQVSVEATQG LERRLTISVP AEQIEKLVKD SLQREAKRAR IPGFRPGKVP VTVINKRYGA 
AIRQDITGEV MQRNFIEAII AEKLNPAGAP TFVPGATDGE KFEFVATFEI YPEVELKGLD
AIVVEQPKAS VTDADVDSMI ETLRKQHATF AAVEREAVDG DKVKMNFVGS VDGVEFEGGK
AEDFELQLGS GRMIPGFEAG ILGHKAGEEF VIDVTFPEEY HAENLKGKAA KFAITLTEVL
AANLPEVNDE FAALFGITEG GLEALKTEIR KNMNRELEQA LKANVKEQVI AGLLANNDIE
LPKALIDGEV NVLRQQAMQR FGGQTANMPE LPAELFTEQA ARRVKIGLLL GEVIKTNELK
AEDERVQGLI ASMASAYEDP SEVIAYYNSN KELMQNMRNV ALEEQAVEAL LKTAKVTEKT
VAFEEFMNKA TGRA