Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1790 |
Symbol | ppiB-1 |
ID | 1169563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 1876618 |
End bp | 1877112 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637343675 |
Product | peptidyl-prolyl cis-trans isomerase B |
Protein accession | NP_717399 |
Protein GI | 24373356 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCACAT TACACACTAA TTTTGGCGAC ATTAAACTGC AACTAAATGC CGAAAAAGCA CCGCTGACCG TGGCAAACTT TATGAAATAT GTCGACGAAG GTTTCTTCGA TGGCACCATT TTCCACCGTG TAATTGACGG CTTTATGATC CAAGGTGGTG GCTTTACGGC TGAAATGAGC CAAAAACGTT GCCATGAGCC AGTGAAAAAT GAAGCGAACA ATGGTTTATC AAACCGTACT GGTACTATCG CTATGGCGCG TACTTCTGAT CCGCATTCAG CGACAGCTCA ATTCTTTATC AACGTAAACG ACAATACCTT CCTCGATTTT AAATCTGAGA GCATGCAAGG TTGGGGTTAC TGCGTATTCG GTGAAGTAGT TGAAGGCATG GACATTATTG AAAAAATCAA AGCGGTAAGC ACAGGTAACC GTGGCATGCA TCAAGATGTA CCATTAGAAG CGGTCGTGAT TGAAAAAGTC AGTGTAGCGG CCTAA
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Protein sequence | MITLHTNFGD IKLQLNAEKA PLTVANFMKY VDEGFFDGTI FHRVIDGFMI QGGGFTAEMS QKRCHEPVKN EANNGLSNRT GTIAMARTSD PHSATAQFFI NVNDNTFLDF KSESMQGWGY CVFGEVVEGM DIIEKIKAVS TGNRGMHQDV PLEAVVIEKV SVAA
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