| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1789 |
|---|
| Symbol | |
|---|
| ID | 1169562 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 1875889 |
|---|
| End bp | 1876608 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637343674 |
|---|
| Product | UDP-2,3-diacylglucosamine hydrolase |
|---|
| Protein accession | NP_717398 |
|---|
| Protein GI | 24373355 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2908] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR01854] UDP-2,3-diacylglucosamine hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAACCT TATTTATTGG CGATCTGCAC TTAAGTGCCG ATCGCCTTGA TATCACTCAA
GCCTTCAATC GTTTCCTCGA TACCGAACTT GATGACGCTG ATGCCCTCTA TATTTTGGGG
GATCTGTTTG AGGTATGGGT CGGCGACGAT TTAGCCGCGC CTTTTGCCCT CGAATTAGCG
CACAAACTCA AACAAGTCTC ACAAACTCTC CCTATCTTCT TTATTCACGG TAATCGTGAT
TTTATGTTAG GAAAACGCTT TGCTGAGGCC GCGGGGATGC AACTTCTACC TGAAGTTACT
TGCATAGAGT TATATGGCGT AAAGACGGTG ATCCTACACG GCGACAGTCT GTGTACCTTA
GATAAAGCCT ATCAACGCTT CCGTAAACTG CGCAGTTTTG CCTGCGCCCG TTGGCTTTAT
AGCTGTCTGC CAAAGAAAAG ACGTCAAGCC ATCGCCAATA AAATCCGCAG TAATAGCCAA
AGCAGTAATC AGCAAAAAAG CTATGTCATT ATGGATGTCG AGCCAAGCGC GGTGAATGCG
TTGTTTGTAA AAACCCATAC AACACGGATG ATCCACGGTC ATACCCACAG ACCTGCCATT
CATATTGTAG ATAATGCTTG TCAACGGATT GTGGTAGGTG ATTGGTACGA GCAAGGCAGT
GTACTGAGTG TCAGTGCCAA CGGCGTGGAT TTAAAAAGTC TGCCCTTTGA AACCACTTAA
|
|---|
| Protein sequence | MRTLFIGDLH LSADRLDITQ AFNRFLDTEL DDADALYILG DLFEVWVGDD LAAPFALELA
HKLKQVSQTL PIFFIHGNRD FMLGKRFAEA AGMQLLPEVT CIELYGVKTV ILHGDSLCTL
DKAYQRFRKL RSFACARWLY SCLPKKRRQA IANKIRSNSQ SSNQQKSYVI MDVEPSAVNA
LFVKTHTTRM IHGHTHRPAI HIVDNACQRI VVGDWYEQGS VLSVSANGVD LKSLPFETT
|
|---|
| |