Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1762 |
Symbol | |
ID | 1169536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 1841189 |
End bp | 1842025 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637343649 |
Product | AraC/XylS family transcriptional regulator |
Protein accession | NP_717372 |
Protein GI | 24373329 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACACAG AACATGCGGC CTACCAGATT GCCAATGAAT TAGGTGGCCT CGAGTTACTC AATGCCCACT ACCATAAACA AAATTTTAGC CGCCATACCC ACGAAGGCTA CACAGTCGGC GTGATAGAAA CGGGCGCCCA GCGTTTTTAT CGCACTGGTG GTAACCATGT GGCGCCAAAA CACAGCATTA TTCTTGTCAA TGCCGACGAA GTGCATAATG GTTGTAGCGC CACAGAGGAT GGCTGGTCCT ACCGAGCTAT GTATCCAGTA CCCGCGCAGT TTGCCAATAT AAACAAAGAA CTAGCATCAA ATCGCGGGGC ACCGTATTTC CCAAATCCCG TGGTGTACGA TCCGCAGCTC GCCGAACTGC TGCGCCTCAC CTTTACCACC TTAGATACAT CGGATAATCG CTTACTGCGC GAAAGCTTAG TCTATTCAAG TCTTACGCAA TTAATGGCGC GCCATGGCCG TAATTATCCC TGTGAGCACT TGGGGGCAAA CGCTAAGCCT GCGTTAGCAC TGGTAAAATC CTTTATCGAC GATCACCCCG CGGCAGATAT CTCCCTTGAA GATCTCGCCA CACTGGCGGG ATTAAGCCCC TATTATTTGC TGAAGCAATT TCAACATTAT TACGGCTTAC CACCCCATGC TTACCAAATT CAGGCCAGAG TGAGACTCGC CAAGGCAAAA ATCAAACAAG GCACTCGGCT ACTCGATGTC GCCCTCGATT GCGGTTTTCA CGATCAAAGC CACTTAAATC GCCATTTTAA AAAGACCGTT GGCGTAACGC CGGGGCAATT TGCCAAAGAA ATAGGCCGCA ATTTTATCCA AGCTTAA
|
Protein sequence | MNTEHAAYQI ANELGGLELL NAHYHKQNFS RHTHEGYTVG VIETGAQRFY RTGGNHVAPK HSIILVNADE VHNGCSATED GWSYRAMYPV PAQFANINKE LASNRGAPYF PNPVVYDPQL AELLRLTFTT LDTSDNRLLR ESLVYSSLTQ LMARHGRNYP CEHLGANAKP ALALVKSFID DHPAADISLE DLATLAGLSP YYLLKQFQHY YGLPPHAYQI QARVRLAKAK IKQGTRLLDV ALDCGFHDQS HLNRHFKKTV GVTPGQFAKE IGRNFIQA
|
| |