Gene SO_1659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1659 
Symbol 
ID1169453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1746105 
End bp1748381 
Gene Length2277 bp 
Protein Length758 aa 
Translation table11 
GC content46% 
IMG OID637343567 
Productdecaheme cytochrome c 
Protein accessionNP_717270 
Protein GI24373227 
COG category 
COG ID 
TIGRFAM ID[TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACT ACAATAAATC TCTACTGGCA CTAGCTCTCA CTAGTGCCTT GTGTTTAACC 
GCCTGCGGGG ACGGAGAAGA CGGGAAAGAC GGTGCCCCCG GAACACCCGG CACCCCAGGA
ACGCCTGGAA CACCAGGTCT TCCTGCTGGT TCTTTTGCTA AAACCGCAGA ATCTATAACC
GATCTGAAAT TCACCCTTAG CCCCGCCGAC ATTAAAGTCA CGAGTAGTGA AGGCTTTAGT
GTTAAGTTTA CCTTAACCGG AAAGAGCTCA GGCAAAGACG TCCCCTTTAT GGGACTCGAT
AAAATTGCCG TTTACTCTTT AACGGCAAAT GAAAACACTT CTGGAACTGG TGCGCCAATT
GAATGGCAAA ACAATGCCAC AGCAAACAAA GCTGGCAGCT CATTAACGTG TACACTCAAC
GGCCTAAACG GTACTAAGAA TGCGTGTACA TTAAAAGAAG ATGCGGCAAA TCCAGGTACC
TACACAGCCA CGTGGACCTA TGATGGCGCT GCGCCAATCA TCAATCCAAA CGATAACCCT
AACGCGGTTC ACAGAGTATT TGTACGTGCT TACAATATCG TCAATAGCCA AGGCGTCGCC
TTAGCGGATA AAGTACTGTC AGTACCCGTT GATTTTATTC CTACAACTGA TGAGCTAGCC
GCATCAGGTA AAGACACAGT ATCGAGTGCC GCATGTAAAA ACTGTCACGG TGAAGTGGAT
GGCCATATCG CCAAGATTGA AGCCCACCAT AACTATCAAG ATGTTAAAAA CTGTGTAACT
TGCCACAATC CTGATCTCGT TCCTAGCGAT GCTCAACTTG CTGAAGGTTG GGTATTTGAT
TTTGCTCCCA TGATCCACCG CATCCACGCG GGTGAACATA ATGCAGCTTA TCTCTCAGGT
GAAGCGAAAG AATACTTTGG TGAAATTGGT TTCCCATCAG ACTTGAAAGA ATGTAAATCC
TGTCATGATG GTGCACCAAG TTATAACACC AATATCTACG CTCAAGCTTG TGTGGGTTGC
CATATTAATG TCAACTTCGC TACTGGTGAA AACCACTCTG AGTTTGGTCT AGCCCAAGCT
GATGATACTC AGTGTAAATC TTGCCACGGC AGCGGCAGCC TAACACCTGA GGCAGTTCAC
AGTGTTGGCA AACGTGCTGA ATATGCTGAT TTATTTAAAG TGGACTTTAC AAGTGCAGCA
GTAGTTCCAT CAGCCACCTT AGGTATGAAG ACGTTAACCC TCAAGGCCAA CGTAAGCATC
AATGGCGCCC CCATTGCCGA TGGAACAAGC CTTGCAACTT ATCATGCTAC AAACAATCCA
ACAGGAAAGT TAGTTGCTAA CGGCTTATTG CTGGGTAATG TTGCTACCGA TGGTACTGTT
TATGCGTGGC GTGATGTTAA ACCTACAGCT ATCAGCTTAA ACTTAGCAAG CGGTACGCTT
TCTGGCGGTG TATTAACTTT CGTTAAAGAT ATTCCTGATG CACAAGCAAT AGGAACCATC
TACGTCAGTT CAGAAGCTAA CGCTTGTATT AAAGCTGGCG CGGTAACAAG CTGTAATGCA
ACTGGACTTG AGTTTGGACC CACAAACCCA ATAGGTAACA GCTCCCCTGT TAAATTCTTC
AGCTTAGATG GAAGCGCAGT CAGCACTGCT CGTATGGCAG ACCCAAGTCG TATTACTGTT
GAAGAAGCAA AATGTAATGC CTGTCACGGC ACCTTAGACT ATATCAAAGG AACAAGACAT
GGCACTTACA CCTTCACTCA GTGTATGAAC TGTCATAACG ATACAACAGG TGCTTCAGGT
CACAAAACGG TTGTTTACAA AGGTGATGAT GGAAGCAAAG TGGTTAATCC AGACGTTACC
TTCAACAACA AAGACCTGTT CACTGTTGCC CACCGTTTCC ACAGTGGTAA CTTTGACTCT
ATCACAGGTA TCTTCCGTAA TGCTGCTGGT GAGTTAGAAG GTTATCCATC GCCAGAAACC
GCATGTTCTG CTTGCCATAA AGACAGCGCT AAACTGTTCG CAACTGACGG TGGTTTAACC
TCAGAAAAAC GTTCGATCAA AGTGGGTAGC AACTACATTA GCCCAGTGGC TGAATCATGC
CGCAGCTGTC ACGCTCACTC AGATGCAGCA GCAGTAGCCC ACTTTAGAAG TAACGGTGCG
ATTGTAGAAG CGGATGCAGT CACCGATTCT AACCTACCAG TAGAATCATG CGCGACCTGC
CATGCTGAAG GTAAAACCTA TGGCATAGAT AAGGTACACG CAGAGGTAGC ACACTAG
 
Protein sequence
MKNYNKSLLA LALTSALCLT ACGDGEDGKD GAPGTPGTPG TPGTPGLPAG SFAKTAESIT 
DLKFTLSPAD IKVTSSEGFS VKFTLTGKSS GKDVPFMGLD KIAVYSLTAN ENTSGTGAPI
EWQNNATANK AGSSLTCTLN GLNGTKNACT LKEDAANPGT YTATWTYDGA APIINPNDNP
NAVHRVFVRA YNIVNSQGVA LADKVLSVPV DFIPTTDELA ASGKDTVSSA ACKNCHGEVD
GHIAKIEAHH NYQDVKNCVT CHNPDLVPSD AQLAEGWVFD FAPMIHRIHA GEHNAAYLSG
EAKEYFGEIG FPSDLKECKS CHDGAPSYNT NIYAQACVGC HINVNFATGE NHSEFGLAQA
DDTQCKSCHG SGSLTPEAVH SVGKRAEYAD LFKVDFTSAA VVPSATLGMK TLTLKANVSI
NGAPIADGTS LATYHATNNP TGKLVANGLL LGNVATDGTV YAWRDVKPTA ISLNLASGTL
SGGVLTFVKD IPDAQAIGTI YVSSEANACI KAGAVTSCNA TGLEFGPTNP IGNSSPVKFF
SLDGSAVSTA RMADPSRITV EEAKCNACHG TLDYIKGTRH GTYTFTQCMN CHNDTTGASG
HKTVVYKGDD GSKVVNPDVT FNNKDLFTVA HRFHSGNFDS ITGIFRNAAG ELEGYPSPET
ACSACHKDSA KLFATDGGLT SEKRSIKVGS NYISPVAESC RSCHAHSDAA AVAHFRSNGA
IVEADAVTDS NLPVESCATC HAEGKTYGID KVHAEVAH