Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1659 |
Symbol | |
ID | 1169453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 1746105 |
End bp | 1748381 |
Gene Length | 2277 bp |
Protein Length | 758 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637343567 |
Product | decaheme cytochrome c |
Protein accession | NP_717270 |
Protein GI | 24373227 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAACT ACAATAAATC TCTACTGGCA CTAGCTCTCA CTAGTGCCTT GTGTTTAACC GCCTGCGGGG ACGGAGAAGA CGGGAAAGAC GGTGCCCCCG GAACACCCGG CACCCCAGGA ACGCCTGGAA CACCAGGTCT TCCTGCTGGT TCTTTTGCTA AAACCGCAGA ATCTATAACC GATCTGAAAT TCACCCTTAG CCCCGCCGAC ATTAAAGTCA CGAGTAGTGA AGGCTTTAGT GTTAAGTTTA CCTTAACCGG AAAGAGCTCA GGCAAAGACG TCCCCTTTAT GGGACTCGAT AAAATTGCCG TTTACTCTTT AACGGCAAAT GAAAACACTT CTGGAACTGG TGCGCCAATT GAATGGCAAA ACAATGCCAC AGCAAACAAA GCTGGCAGCT CATTAACGTG TACACTCAAC GGCCTAAACG GTACTAAGAA TGCGTGTACA TTAAAAGAAG ATGCGGCAAA TCCAGGTACC TACACAGCCA CGTGGACCTA TGATGGCGCT GCGCCAATCA TCAATCCAAA CGATAACCCT AACGCGGTTC ACAGAGTATT TGTACGTGCT TACAATATCG TCAATAGCCA AGGCGTCGCC TTAGCGGATA AAGTACTGTC AGTACCCGTT GATTTTATTC CTACAACTGA TGAGCTAGCC GCATCAGGTA AAGACACAGT ATCGAGTGCC GCATGTAAAA ACTGTCACGG TGAAGTGGAT GGCCATATCG CCAAGATTGA AGCCCACCAT AACTATCAAG ATGTTAAAAA CTGTGTAACT TGCCACAATC CTGATCTCGT TCCTAGCGAT GCTCAACTTG CTGAAGGTTG GGTATTTGAT TTTGCTCCCA TGATCCACCG CATCCACGCG GGTGAACATA ATGCAGCTTA TCTCTCAGGT GAAGCGAAAG AATACTTTGG TGAAATTGGT TTCCCATCAG ACTTGAAAGA ATGTAAATCC TGTCATGATG GTGCACCAAG TTATAACACC AATATCTACG CTCAAGCTTG TGTGGGTTGC CATATTAATG TCAACTTCGC TACTGGTGAA AACCACTCTG AGTTTGGTCT AGCCCAAGCT GATGATACTC AGTGTAAATC TTGCCACGGC AGCGGCAGCC TAACACCTGA GGCAGTTCAC AGTGTTGGCA AACGTGCTGA ATATGCTGAT TTATTTAAAG TGGACTTTAC AAGTGCAGCA GTAGTTCCAT CAGCCACCTT AGGTATGAAG ACGTTAACCC TCAAGGCCAA CGTAAGCATC AATGGCGCCC CCATTGCCGA TGGAACAAGC CTTGCAACTT ATCATGCTAC AAACAATCCA ACAGGAAAGT TAGTTGCTAA CGGCTTATTG CTGGGTAATG TTGCTACCGA TGGTACTGTT TATGCGTGGC GTGATGTTAA ACCTACAGCT ATCAGCTTAA ACTTAGCAAG CGGTACGCTT TCTGGCGGTG TATTAACTTT CGTTAAAGAT ATTCCTGATG CACAAGCAAT AGGAACCATC TACGTCAGTT CAGAAGCTAA CGCTTGTATT AAAGCTGGCG CGGTAACAAG CTGTAATGCA ACTGGACTTG AGTTTGGACC CACAAACCCA ATAGGTAACA GCTCCCCTGT TAAATTCTTC AGCTTAGATG GAAGCGCAGT CAGCACTGCT CGTATGGCAG ACCCAAGTCG TATTACTGTT GAAGAAGCAA AATGTAATGC CTGTCACGGC ACCTTAGACT ATATCAAAGG AACAAGACAT GGCACTTACA CCTTCACTCA GTGTATGAAC TGTCATAACG ATACAACAGG TGCTTCAGGT CACAAAACGG TTGTTTACAA AGGTGATGAT GGAAGCAAAG TGGTTAATCC AGACGTTACC TTCAACAACA AAGACCTGTT CACTGTTGCC CACCGTTTCC ACAGTGGTAA CTTTGACTCT ATCACAGGTA TCTTCCGTAA TGCTGCTGGT GAGTTAGAAG GTTATCCATC GCCAGAAACC GCATGTTCTG CTTGCCATAA AGACAGCGCT AAACTGTTCG CAACTGACGG TGGTTTAACC TCAGAAAAAC GTTCGATCAA AGTGGGTAGC AACTACATTA GCCCAGTGGC TGAATCATGC CGCAGCTGTC ACGCTCACTC AGATGCAGCA GCAGTAGCCC ACTTTAGAAG TAACGGTGCG ATTGTAGAAG CGGATGCAGT CACCGATTCT AACCTACCAG TAGAATCATG CGCGACCTGC CATGCTGAAG GTAAAACCTA TGGCATAGAT AAGGTACACG CAGAGGTAGC ACACTAG
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Protein sequence | MKNYNKSLLA LALTSALCLT ACGDGEDGKD GAPGTPGTPG TPGTPGLPAG SFAKTAESIT DLKFTLSPAD IKVTSSEGFS VKFTLTGKSS GKDVPFMGLD KIAVYSLTAN ENTSGTGAPI EWQNNATANK AGSSLTCTLN GLNGTKNACT LKEDAANPGT YTATWTYDGA APIINPNDNP NAVHRVFVRA YNIVNSQGVA LADKVLSVPV DFIPTTDELA ASGKDTVSSA ACKNCHGEVD GHIAKIEAHH NYQDVKNCVT CHNPDLVPSD AQLAEGWVFD FAPMIHRIHA GEHNAAYLSG EAKEYFGEIG FPSDLKECKS CHDGAPSYNT NIYAQACVGC HINVNFATGE NHSEFGLAQA DDTQCKSCHG SGSLTPEAVH SVGKRAEYAD LFKVDFTSAA VVPSATLGMK TLTLKANVSI NGAPIADGTS LATYHATNNP TGKLVANGLL LGNVATDGTV YAWRDVKPTA ISLNLASGTL SGGVLTFVKD IPDAQAIGTI YVSSEANACI KAGAVTSCNA TGLEFGPTNP IGNSSPVKFF SLDGSAVSTA RMADPSRITV EEAKCNACHG TLDYIKGTRH GTYTFTQCMN CHNDTTGASG HKTVVYKGDD GSKVVNPDVT FNNKDLFTVA HRFHSGNFDS ITGIFRNAAG ELEGYPSPET ACSACHKDSA KLFATDGGLT SEKRSIKVGS NYISPVAESC RSCHAHSDAA AVAHFRSNGA IVEADAVTDS NLPVESCATC HAEGKTYGID KVHAEVAH
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