Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1636 |
Symbol | |
ID | 1169430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 1717535 |
End bp | 1718905 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637343544 |
Product | membrane-associated zinc metalloprotease, putative |
Protein accession | NP_717247 |
Protein GI | 24373204 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGATT TTTTGTGGAA CTTAGGTTCT TTTATCGTAG CGCTTGGGCT GTTGATTACT GCCCACGAAT ACGGCCATTT CTATGTTGCA CGCCGCTGTG GTGTGAAAGT TGAACGTTTT TCGATAGGTT TTGGTAAGAC GATTTGGCGC AAAGTGGGTA AGGATGGCAC TGAATATGTC GTTGCCATGA TCCCGCTGGG TGGCTATGTC AAAATGCTCG ATGAGCGCGT TGAAGATGTC CCCGAAGAGT TAAAGGACCA AGCCTTTAAC CGTAAAAGTG TGTGGCAACG CATTGCCATT GTGGCGGCAG GCCCTATTGC CAACTTTATC TTTGCGATTA TCGCACTGTA TTTTATGTAT TTAATTGGCG TGCCATCGCT AAAGCCCGTC ATTACCTCAA CCACGCCCGG CAGCGCAGCT GCGCAAATAA AGGTGAATGA GCCGATGCAA GTGACGGCGA TTTCTGGCCA AGCAGTACGA AATTGGGAAG AAGTCAATTT AGCCCTTGTT GGTCATATTG GTGATGACAG TTTAACCGTG TCTCTCGCGC CGCTAAGTGG TTTGCAGGGG TTAGACACTG ATACTCGCAC CTACACCTTA GATACCCGTC AATGGCGGTT TGACCCTGAA AAAGAGTCAC CGATAACTAC CCTAGGTTTG GGGGTTTATC GCCCTGCGAT TGAACCGCAA ATTGCGCTCA TCAGCGAAGG CAGTGCAGCT GCAAACAGTG ATCTCAAAGT CGGTGATACT TTAGTTGCTA TAAATGGTCA GCAATATACT GACTGGCAAG CTTTTGTTGA CATTATTCAG CATTCTGCCA ATGTGCCAGT GGAGTTAACA GTGCGCCGTA ATGGCGAACA GTTTGCCATC TCAGTGACTC CTGCGAGTAT TAAAAATAGT GATGGCAAGG AGATAGGCGT GCTTGGCGTG AGCCCGACTC AGGCACAATG GCCTGAGAAT ATGCGTCTGC AACTCGAATA TGGCCCAATC GATTCTTTTG CTATTGCAGC CGATAAAACA TGGCAACTTG TTGCTGTGAG CTTTAAGATG ATTGGCAAAT TATTTACTGG CGATGTGTCA GTGAAAAACT TAAGTGGACC TATCTCAATC GCACAGGGTG CGGGCAATAG TGCAAACTAT GGCTTGGTTT ACTTTCTCGG TTTCCTCGCG CTTATCAGTG TCAATTTAGG CATCATTAAC CTGCTGCCAT TGCCTGTGCT CGATGGGGGA CATCTGCTGT ATTACTTCGT TGAAGTCATT ACAGGTAAGC CTGTGTCTGA AAAGGTACAG GAAATAGGAT TCAGATTTGG GGCAGCATTA CTGCTGATGT TGATGAGCAT TGCGCTCTTC AACGATTTTG CCCGACTCTG A
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Protein sequence | MLDFLWNLGS FIVALGLLIT AHEYGHFYVA RRCGVKVERF SIGFGKTIWR KVGKDGTEYV VAMIPLGGYV KMLDERVEDV PEELKDQAFN RKSVWQRIAI VAAGPIANFI FAIIALYFMY LIGVPSLKPV ITSTTPGSAA AQIKVNEPMQ VTAISGQAVR NWEEVNLALV GHIGDDSLTV SLAPLSGLQG LDTDTRTYTL DTRQWRFDPE KESPITTLGL GVYRPAIEPQ IALISEGSAA ANSDLKVGDT LVAINGQQYT DWQAFVDIIQ HSANVPVELT VRRNGEQFAI SVTPASIKNS DGKEIGVLGV SPTQAQWPEN MRLQLEYGPI DSFAIAADKT WQLVAVSFKM IGKLFTGDVS VKNLSGPISI AQGAGNSANY GLVYFLGFLA LISVNLGIIN LLPLPVLDGG HLLYYFVEVI TGKPVSEKVQ EIGFRFGAAL LLMLMSIALF NDFARL
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